NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS6377.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6377.1 Public Homo sapiens 8 KCNK9 24 110 108 CCDS HistoryNCBI Gene:51305Re-query CCDS DB by CCDS ID:6377.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6377.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000303015.2 ENSP00000302166.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000303015.2Link to Ensembl Protein Viewer:ENSP00000302166.1Re-query CCDS DB by Nucleotide ID:ENST00000303015Re-query CCDS DB by Protein ID:ENSP00000302166
Original member Current member EBI ENST00000522317.5 ENSP00000429847.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000522317.5Link to Ensembl Protein Viewer:ENSP00000429847.1Re-query CCDS DB by Nucleotide ID:ENST00000522317Re-query CCDS DB by Protein ID:ENSP00000429847
Original member Current member EBI ENST00000520439.3 ENSP00000430676.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000520439.3Link to Ensembl Protein Viewer:ENSP00000430676.1Re-query CCDS DB by Nucleotide ID:ENST00000520439Re-query CCDS DB by Protein ID:ENSP00000430676
Original member Current member EBI ENST00000650269.1 ENSP00000496915.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000650269.1Link to Ensembl Protein Viewer:ENSP00000496915.1Re-query CCDS DB by Nucleotide ID:ENST00000650269Re-query CCDS DB by Protein ID:ENSP00000496915
Original member Current member EBI ENST00000648164.1 ENSP00000498198.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000648164.1Link to Ensembl Protein Viewer:ENSP00000498198.1Re-query CCDS DB by Nucleotide ID:ENST00000648164Re-query CCDS DB by Protein ID:ENSP00000498198
Original member Current member NCBI NM_001282534.2 NP_001269463.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001282534.2Link to Protein Sequence:NP_001269463.1Re-query CCDS DB by Nucleotide ID:NM_001282534Re-query CCDS DB by Protein ID:NP_001269463Link to BLAST:NP_001269463.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269463.1 374 Q9NPC2 374 100% 0 0

Chromosomal Locations for CCDS 6377.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 139618258 139619099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 139702710 139702992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1125 nt):
ATGAAGAGGCAGAACGTGCGGACTCTGTCCCTCATCGTCTGCACCTTCACCTACCTGCTGGTGGGCGCCG
CCGTGTTCGACGCCCTCGAGTCGGACCACGAGATGCGCGAGGAGGAGAAACTCAAAGCCGAGGAGATCCG
GATCAAGGGGAAGTACAACATCAGCAGCGAGGACTACCGGCAGCTGGAGCTGGTGATCCTGCAGTCGGAA
CCGCACCGCGCCGGCGTCCAGTGGAAATTCGCCGGCTCCTTCTACTTTGCGATCACGGTCATCACCACCA
TAGGTTATGGGCACGCTGCACCTGGCACCGATGCGGGCAAGGCCTTCTGCATGTTCTACGCCGTGCTGGG
CATCCCGCTGACACTGGTCATGTTCCAGAGCCTGGGCGAGCGCATGAACACCTTCGTGCGCTACCTGCTG
AAGCGCATTAAGAAGTGCTGTGGCATGCGCAACACTGACGTGTCTATGGAGAACATGGTGACTGTGGGCT
TCTTCTCCTGCATGGGGACGCTGTGCATCGGGGCGGCCGCCTTCTCCCAGTGTGAGGAGTGGAGCTTCTT
CCACGCCTACTACTACTGCTTCATCACGTTGACTACCATTGGGTTCGGGGACTACGTGGCCCTGCAGACC
AAGGGTGCCCTGCAGAAGAAGCCGCTCTACGTGGCCTTTAGCTTTATGTATATCCTGGTGGGGCTGACGG
TCATCGGGGCCTTCCTCAACCTGGTCGTCCTCAGGTTCTTGACCATGAACAGTGAGGATGAGCGGCGGGA
TGCTGAAGAGAGGGCATCCCTCGCCGGAAACCGCAACAGCATGGTCATTCACATCCCTGAGGAGCCGCGG
CCCAGCCGGCCCAGGTACAAGGCGGACGTCCCGGACCTGCAGTCTGTGTGCTCCTGCACCTGCTACCGCT
CGCAGGACTATGGCGGCCGCTCGGTGGCACCGCAGAACTCCTTCAGCGCCAAGCTTGCCCCCCACTACTT
CCACTCCATCTCTTACAAGATCGAGGAGATCTCACCAAGCACATTAAAAAACAGCCTCTTCCCATCGCCT
ATTAGCTCCATCTCTCCTGGGTTACACAGCTTTACCGACCACCAGAGGCTGATGAAACGCCGGAAGTCCG
TTTAG

Translation (374 aa):
MKRQNVRTLSLIVCTFTYLLVGAAVFDALESDHEMREEEKLKAEEIRIKGKYNISSEDYRQLELVILQSE
PHRAGVQWKFAGSFYFAITVITTIGYGHAAPGTDAGKAFCMFYAVLGIPLTLVMFQSLGERMNTFVRYLL
KRIKKCCGMRNTDVSMENMVTVGFFSCMGTLCIGAAAFSQCEEWSFFHAYYYCFITLTTIGFGDYVALQT
KGALQKKPLYVAFSFMYILVGLTVIGAFLNLVVLRFLTMNSEDERRDAEERASLAGNRNSMVIHIPEEPR
PSRPRYKADVPDLQSVCSCTCYRSQDYGGRSVAPQNSFSAKLAPHYFHSISYKIEEISPSTLKNSLFPSP
ISSISPGLHSFTDHQRLMKRRKSV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH