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Report for CCDS11167.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11167.1 Public Homo sapiens 17 HS3ST3B1 24 110 108 CCDS HistoryNCBI Gene:9953Re-query CCDS DB by CCDS ID:11167.1Re-query CCDS DB by GeneID:9953See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11167.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360954.3 ENSP00000354213.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000360954.3Link to Ensembl Protein Viewer:ENSP00000354213.2Re-query CCDS DB by Nucleotide ID:ENST00000360954Re-query CCDS DB by Protein ID:ENSP00000354213
Original member Current member EBI ENST00000466596.5 ENSP00000436078.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000466596.5Link to Ensembl Protein Viewer:ENSP00000436078.1Re-query CCDS DB by Nucleotide ID:ENST00000466596Re-query CCDS DB by Protein ID:ENSP00000436078
Original member Current member NCBI NM_006041.3 NP_006032.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006041.3Link to Protein Sequence:NP_006032.1Re-query CCDS DB by Nucleotide ID:NM_006041Re-query CCDS DB by Protein ID:NP_006032Link to BLAST:NP_006032.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006032.1 390 Q9Y662 390 100% 0 0

Chromosomal Locations for CCDS 11167.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 14301519 14302072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 14345028 14345646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1173 nt):
ATGGGGCAGCGCCTGAGTGGCGGCAGATCTTGCCTCGATGTCCCCGGCCGGCTCCTACCGCAGCCGCCGC
CGCCCCCGCCGCCGGTGAGGAGGAAGCTCGCGCTGCTCTTCGCCATGCTCTGCGTCTGGCTCTATATGTT
CCTGTACTCGTGCGCCGGCTCCTGCGCCGCCGCGCCGGGGCTGCTGCTCCTGGGCTCTGGGTCCCGCGCC
GCACACGACCCGCCAGCCCTGGCCACAGCTCCGGACGGGACGCCCCCCAGGCTGCCGTTCCGGGCGCCGC
CAGCCACCCCACTGGCTTCAGGCAAGGAGATGGCCGAGGGCGCTGCGAGCCCGGAGGAGCAGAGTCCCGA
GGTGCCGGACTCCCCAAGCCCCATCTCCAGCTTTTTCAGTGGGTCTGGGAGCAAGCAGCTGCCGCAGGCC
ATCATCATCGGCGTGAAGAAGGGCGGCACGCGGGCGCTGCTGGAGTTTCTGCGCGTGCACCCCGACGTGC
GCGCCGTGGGCGCCGAGCCCCATTTCTTCGATCGCAGCTACGACAAGGGCCTCGCTTGGTACCGGGACCT
GATGCCCAGAACCCTGGACGGGCAGATCACCATGGAGAAGACGCCCAGTTACTTCGTCACGCGGGAGGCC
CCTGCGCGCATCTCGGCCATGTCCAAGGACACCAAGCTCATCGTGGTGGTGCGGGACCCGGTGACCAGGG
CCATCTCGGACTACACGCAGACGCTGTCCAAGCGGCCCGACATCCCCACCTTCGAGAGCTTGACGTTCAA
AAACAGGACAGCGGGCCTCATCGACACGTCGTGGAGCGCCATCCAGATCGGCATCTACGCCAAGCACCTG
GAGCACTGGCTGCGCCACTTCCCCATCCGCCAGATGCTCTTCGTGAGCGGCGAGCGGCTCATCAGCGACC
CGGCCGGGGAGCTGGGCCGCGTGCAAGACTTCCTGGGCCTCAAGAGGATCATCACGGACAAGCACTTCTA
CTTCAACAAGACCAAGGGCTTCCCCTGCCTGAAGAAGGCGGAGGGCAGCAGCCGGCCCCATTGCCTGGGC
AAGACCAAGGGCAGGACCCATCCTGAGATCGACCGCGAGGTGGTGCGCAGGCTGCGCGAGTTCTACCGGC
CTTTCAACCTCAAGTTCTACCAGATGACCGGGCACGACTTTGGCTGGGATTGA

Translation (390 aa):
MGQRLSGGRSCLDVPGRLLPQPPPPPPPVRRKLALLFAMLCVWLYMFLYSCAGSCAAAPGLLLLGSGSRA
AHDPPALATAPDGTPPRLPFRAPPATPLASGKEMAEGAASPEEQSPEVPDSPSPISSFFSGSGSKQLPQA
IIIGVKKGGTRALLEFLRVHPDVRAVGAEPHFFDRSYDKGLAWYRDLMPRTLDGQITMEKTPSYFVTREA
PARISAMSKDTKLIVVVRDPVTRAISDYTQTLSKRPDIPTFESLTFKNRTAGLIDTSWSAIQIGIYAKHL
EHWLRHFPIRQMLFVSGERLISDPAGELGRVQDFLGLKRIITDKHFYFNKTKGFPCLKKAEGSSRPHCLG
KTKGRTHPEIDREVVRRLREFYRPFNLKFYQMTGHDFGWD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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