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Report for CCDS11990.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11990.1 Public Homo sapiens 18 SERPINB10 24 110 108 CCDS HistoryNCBI Gene:5273Re-query CCDS DB by CCDS ID:11990.1See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11990.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000238508.8 ENSP00000238508.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000238508.8Link to Ensembl Protein Viewer:ENSP00000238508.3Re-query CCDS DB by Nucleotide ID:ENST00000238508Re-query CCDS DB by Protein ID:ENSP00000238508
Original member Current member NCBI NM_005024.3 NP_005015.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005024.3Link to Protein Sequence:NP_005015.1Re-query CCDS DB by Nucleotide ID:NM_005024Re-query CCDS DB by Protein ID:NP_005015Link to BLAST:NP_005015.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005015.1 397 P48595 397 100% 0 0

Chromosomal Locations for CCDS 11990.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 63915511 63915678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63917456 63917521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63917965 63918102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63919788 63919905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63930045 63930187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63933048 63933203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63934838 63935242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1194 nt):
ATGGACTCTCTAGCAACATCAATCAACCAGTTTGCCCTGGAGTTGAGCAAAAAGCTAGCTGAATCTGCTC
AGGGTAAAAATATCTTCTTTTCTTCCTGGAGCATCTCAACTTCCTTGACCATAGTGTATTTGGGCGCCAA
AGGTACCACTGCAGCCCAAATGGCCCAGGTGCTTCAATTTAACAGAGACCAGGGAGTCAAATGTGACCCT
GAAAGTGAAAAAAAAAGGAAAATGGAATTCAACTTGAGCAACTCGGAAGAAATACACTCTGATTTCCAAA
CACTTATCTCAGAAATCCTCAAGCCCAACGATGACTACTTACTTAAAACAGCCAATGCGATATATGGAGA
GAAAACGTATGCATTTCACAATAAATATTTAGAAGACATGAAAACATATTTTGGTGCAGAACCTCAGCCT
GTTAACTTTGTGGAAGCTTCTGATCAAATCAGAAAGGACATCAACTCTTGGGTTGAAAGACAGACCGAGG
GTAAAATCCAGAATCTCCTGCCTGATGACTCTGTGGATTCCACAACCAGGATGATTCTGGTGAACGCCCT
ATACTTTAAAGGAATCTGGGAACATCAATTCTTAGTGCAAAACACCACAGAAAAGCCTTTTAGAATAAAC
GAGACTACAAGCAAACCAGTGCAAATGATGTTTATGAAGAAAAAGCTTCACATTTTTCACATAGAAAAGC
CAAAAGCAGTGGGCCTTCAACTCTACTACAAAAGCCGTGACCTCAGCCTGCTTATACTACTGCCAGAAGA
CATTAATGGGCTGGAACAGCTGGAAAAGGCCATCACCTATGAGAAGCTGAATGAGTGGACCAGTGCAGAC
ATGATGGAGTTGTATGAAGTGCAGCTACACCTTCCCAAGTTCAAGCTGGAAGACAGTTATGATCTCAAGT
CAACCCTGAGCAGTATGGGGATGAGTGATGCCTTCAGCCAAAGCAAAGCTGATTTCTCAGGAATGTCTTC
AGCAAGAAACCTATTTTTGTCCAATGTTTTCCATAAGGCTTTTGTGGAAATAAATGAACAAGGTACTGAA
GCTGCAGCTGGCAGTGGGAGTGAGATAGATATACGAATTAGAGTCCCATCCATTGAATTCAATGCAAATC
ACCCATTCCTCTTCTTCATCAGGCACAATAAAACCAACACCATTCTTTTTTATGGAAGATTATGCTCCCC
CTAA

Translation (397 aa):
MDSLATSINQFALELSKKLAESAQGKNIFFSSWSISTSLTIVYLGAKGTTAAQMAQVLQFNRDQGVKCDP
ESEKKRKMEFNLSNSEEIHSDFQTLISEILKPNDDYLLKTANAIYGEKTYAFHNKYLEDMKTYFGAEPQP
VNFVEASDQIRKDINSWVERQTEGKIQNLLPDDSVDSTTRMILVNALYFKGIWEHQFLVQNTTEKPFRIN
ETTSKPVQMMFMKKKLHIFHIEKPKAVGLQLYYKSRDLSLLILLPEDINGLEQLEKAITYEKLNEWTSAD
MMELYEVQLHLPKFKLEDSYDLKSTLSSMGMSDAFSQSKADFSGMSSARNLFLSNVFHKAFVEINEQGTE
AAAGSGSEIDIRIRVPSIEFNANHPFLFFIRHNKTNTILFYGRLCSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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