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Report for CCDS13648.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13648.1 Public Homo sapiens 21 RIPPLY3 24 110 108 CCDS HistoryNCBI Gene:53820Re-query CCDS DB by CCDS ID:13648.1See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13648.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000329553.3 ENSP00000331734.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000329553.3Link to Ensembl Protein Viewer:ENSP00000331734.2Re-query CCDS DB by Nucleotide ID:ENST00000329553Re-query CCDS DB by Protein ID:ENSP00000331734
Original member Current member NCBI NM_018962.3 NP_061835.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018962.3Link to Protein Sequence:NP_061835.1Re-query CCDS DB by Nucleotide ID:NM_018962Re-query CCDS DB by Protein ID:NP_061835Link to BLAST:NP_061835.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061835.1 190 P57055-1 190 100% 0 0

Chromosomal Locations for CCDS 13648.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 37006773 37006876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 37008157 37008223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 37013551 37013618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 37017874 37018207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (573 nt):
ATGGAGCCCGAAGCGGCGGCCGGAGCCCGGAAGGCGCGGGGGCGCGGCTGTCACTGCCCCGGGGACGCTC
CCTGGAGGCCTCCGCCACCGCGCGGGCCGGAGAGCCCCGCGCCGTGGCGACCTTGGATCCAGACACCTGG
AGATGCTGAGCTGACCAGAACTGGAAGGCCGCTTGAACCTAGGGCTGACCAACACACTTTTGGATCAAAG
GGAGCCTTTGGGTTTCAGCATCCTGTAAGAGTCTATTTACCCATGTCAAAGCGTCAAGAATACCTGCGGA
GTTCCGGGGAGCAAGTACTGGCCAGTTTCCCAGTGCAAGCCACGATTGACTTCTACGACGATGAGTCTAC
TGAGTCTGCTTCCGAAGCTGAAGAGCCAGAGGAAGGACCCCCACCCCTCCATCTTCTGCCCCAGGAGGTG
GGAGGTCGGCAGGAAAATGGCCCAGGGGGAAAGGGCAGAGACCAGGGCATCAACCAAGGGCAGCGATCCT
CAGGAGGGGGTGACCACTGGGGGGAGGGTCCGCTCCCTCAAGGTGTCTCCTCAAGGGGTGGCAAGTGCTC
CTCATCCAAATGA

Translation (190 aa):
MEPEAAAGARKARGRGCHCPGDAPWRPPPPRGPESPAPWRPWIQTPGDAELTRTGRPLEPRADQHTFGSK
GAFGFQHPVRVYLPMSKRQEYLRSSGEQVLASFPVQATIDFYDDESTESASEAEEPEEGPPPLHLLPQEV
GGRQENGPGGKGRDQGINQGQRSSGGGDHWGEGPLPQGVSSRGGKCSSSK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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