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Report for CCDS32855.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32855.1 Public Homo sapiens 19 MIER2 24 110 108 CCDS HistoryNCBI Gene:54531Re-query CCDS DB by CCDS ID:32855.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32855.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000264819.7 ENSP00000264819.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000264819.7Link to Ensembl Protein Viewer:ENSP00000264819.3Re-query CCDS DB by Nucleotide ID:ENST00000264819Re-query CCDS DB by Protein ID:ENSP00000264819
Original member Current member NCBI NM_017550.3 NP_060020.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017550.3Link to Protein Sequence:NP_060020.1Re-query CCDS DB by Nucleotide ID:NM_017550Re-query CCDS DB by Protein ID:NP_060020Link to BLAST:NP_060020.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060020.1 545 Q8N344 545 100% 0 0

Chromosomal Locations for CCDS 32855.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 306690 306711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 307119 307536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 308577 308665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 308801 308925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 311845 311939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 312191 312272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 313492 313643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 325635 325704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 326507 326598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 327133 327256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 327864 327989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 334400 334542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 336083 336173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 344774 344782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1638 nt):
ATGGCGGAGGCCTCCTCGCTGGGGAGGCAGAGTCCTCGCGTGGTCTCCTGCCTCGAGCACAGCCTGTGCC
CAGGGGAGCCGGGCTTGCAGACAACAGCAGTGGTGTCCATGGGCTCTGGAGACCATCAGTTCAACCTCGC
AGAGATCCTGTCACAGAACTACAGTGTTAGGGGGGAGTGCGAGGAGGCCTCGAGGTGCCCAGACAAGCCC
AAGGAGGAGCTGGAGAAGGACTTCATCTCCCAGAGCAACGACATGCCCTTTGATGAGCTGCTTGCGCTCT
ATGGCTACGAGGCGTCAGACCCCATTTCAGACCGGGAGAGTGAGGGTGGTGACGTGGCCCCGAACCTCCC
AGACATGACCCTGGACAAAGAACAAATAGCGAAGGATTTGCTTTCAGGGGAAGAAGAGGAAGAGACGCAA
TCATCTGCTGACGACCTCACCCCGTCCGTGACCTCCCACGAGGCCTCCGACCTCTTCCCTAACCGGAGTG
GATCTCGTTTCCTGGCTGATGAAGACAGAGAGCCTGGCTCTTCTGCCTCCTCCGACACCGAGGAGGACTC
TCTTCCTGCCAACAAATGTAAGAAGGAGATCATGGTGGGACCTCAGTTCCAAGCTGACCTCAGCAACCTG
CACTTGAACCGGCACTGTGAGAAGATCTACGAGAACGAAGACCAGCTGCTCTGGGACCCCAGCGTCCTCC
CTGAGAGGGAGGTGGAGGAGTTCCTGTACAGGGCGGTGAAGCGGCGTTGGCACGAGATGGCCGGGCCTCA
GCTCCCAGAGGGAGAAGCCGTGAAAGACAGTGAGCAGGCGCTGTACGAGTTGGTGAAATGCAACTTCAAT
GTGGAGGAGGCCCTGCGAAGGCTGCGGTTCAACGTGAAGGTGATCCGAGATGGGCTCTGTGCTTGGAGTG
AAGAGGAGTGCAGGAACTTTGAGCACGGCTTCCGTGTGCATGGAAAGAACTTTCACCTGATCCAGGCCAA
CAAGGTGCGCACACGGTCAGTGGGCGAGTGTGTCGAGTACTACTACCTGTGGAAGAAGTCGGAGCGCTAC
GACTACTTCGCCCAGCAGACGCGGCTGGGCCGGAGGAAGTACGTCCCGTCCGGAACCACGGACGCAGACC
AGGACCTGGATGGCAGCGACCCCGATGGCCCCGGCCGTCCGCGCCCGGAGCAAGACACCCTGACTGGGAT
GCGCACAGATCCACTGAGCGTGGATGGCACGGCCGGTGGTCTCGATGAGCCCGGAGTGGCCTCTGATGGA
CTCCCGTCCTCGGAGCCAGGGCCGTGTTCCTTCCAGCAGCTGGATGAGTCCCCCGCTGTACCCCTGTCCC
ATCGGCCCCCAGCCCTGGCCGACCCAGCCTCATACCAGCCAGCTGTCACTGCTCCGGAGCCAGACGCCAG
CCCAAGGCTGGCCGTGGACTTCGCCCTGCCCAAGGAGCTGCCCCTCATCTCCAGCCATGTGGACCTCAGC
GGGGATCCGGAGGAGACTGTGGCCCCAGCACAGGTGGCTTTGTCGGTCACCGAGTTTGGACTCATCGGCA
TTGGGGACGTGAACCCCTTCCTGGCCGCCCACCCCACGTGCCCGGCCCCCGGGCTACACTCGGAGCCCCT
GTCACACTGTAACGTGATGACCTGCTGA

Translation (545 aa):
MAEASSLGRQSPRVVSCLEHSLCPGEPGLQTTAVVSMGSGDHQFNLAEILSQNYSVRGECEEASRCPDKP
KEELEKDFISQSNDMPFDELLALYGYEASDPISDRESEGGDVAPNLPDMTLDKEQIAKDLLSGEEEEETQ
SSADDLTPSVTSHEASDLFPNRSGSRFLADEDREPGSSASSDTEEDSLPANKCKKEIMVGPQFQADLSNL
HLNRHCEKIYENEDQLLWDPSVLPEREVEEFLYRAVKRRWHEMAGPQLPEGEAVKDSEQALYELVKCNFN
VEEALRRLRFNVKVIRDGLCAWSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERY
DYFAQQTRLGRRKYVPSGTTDADQDLDGSDPDGPGRPRPEQDTLTGMRTDPLSVDGTAGGLDEPGVASDG
LPSSEPGPCSFQQLDESPAVPLSHRPPALADPASYQPAVTAPEPDASPRLAVDFALPKELPLISSHVDLS
GDPEETVAPAQVALSVTEFGLIGIGDVNPFLAAHPTCPAPGLHSEPLSHCNVMTC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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