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Report for CCDS33764.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33764.1 Public Homo sapiens 3 RBM15B 24 110 108 CCDS HistoryNCBI Gene:29890Re-query CCDS DB by CCDS ID:33764.1Re-query CCDS DB by GeneID:29890See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33764.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000563281.2 ENSP00000454545.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000563281.2Link to Ensembl Protein Viewer:ENSP00000454545.1Re-query CCDS DB by Nucleotide ID:ENST00000563281Re-query CCDS DB by Protein ID:ENSP00000454545
Original member Current member NCBI NM_013286.5 NP_037418.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_013286.5Link to Protein Sequence:NP_037418.3Re-query CCDS DB by Nucleotide ID:NM_013286Re-query CCDS DB by Protein ID:NP_037418Link to BLAST:NP_037418.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_037418.3 890 Q8NDT2-1 890 100% 0 0

Chromosomal Locations for CCDS 33764.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 51391400 51394072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2673 nt):
ATGAAGCGGCAGAGCGAGCGAGACTCTAGCCCGAGCGGGCGCGGCTCGTCATCGTCCGCCAAGCGTCCGC
GGGAGCGCGAACGGGAGGCGGAGGCGGGCGGGCGGCGGGCGGCGCACAAGGCCTCTGGCGGCGCCAAGCA
CCCGGTTCCAGCGCGGGCCCGCGACAAACCCCGCGGCAGCGGAAGCGGCGGGGGCGGGCATCGCGACGGC
CGCGGCACCGGGGACGCGAATCACCGCGCGAGTAGCGGGCGCTCCTCGGGCTCCGGCGCTGGCGGCGGGG
GACGCGGCGGCAAGGCCTCGGGGGACCCGGGCGCCTCCGGCATGTCGCCCCGCGCGTCTCCTCTGCCGCC
GCCTCCGCCACCGCCTGGGGCCGAGCCCGCGTGTCCCGGCTCATCCGCGGCCGCGCCTGAGTACAAGACG
TTGCTCATCAGCAGCTTGAGCCCCGCGCTGCCCGCCGAGCACCTCGAGGACCGGCTCTTCCACCAGTTCA
AGCGCTTCGGCGAGATCAGCCTCCGCCTGTCGCACACGCCTGAGCTGGGCCGTGTGGCCTACGTGAATTT
CCGGCACCCACAGGACGCACGCGAGGCCCGCCAGCACGCCCTGGCCCGGCAGCTGCTGCTCTACGACCGC
CCGCTCAAGGTAGAGCCCGTGTACCTGCGTGGCGGCGGCGGGAGCAGTCGGCGAAGTAGCAGCAGCAGCG
CCGCCGCTTCCACGCCTCCCCCAGGGCCGCCCGCGCCCGCCGACCCGCTCGGCTACCTCCCGCTACACGG
AGGCTACCAGTACAAGCAGCGCTCGCTGTCCCCCGTCGCTGCCCCGCCCCTGCGGGAGCCCCGTGCCCGT
CACGCCGCCGCAGCCTTCGCCCTGGATGCCGCTGCTGCCGCCGCCGTGGGACTGTCCCGGGAGCGGGCCC
TGGACTACTACGGGCTGTACGACGACCGTGGGCGCCCCTATGGCTACCCAGCTGTGTGTGAGGAGGACCT
GATGCCCGAGGATGACCAGCGGGCCACGCGCAACCTCTTCATTGGTAACCTGGACCACAGCGTATCTGAG
GTGGAGCTGCGAAGGGCCTTCGAGAAATATGGCATCATCGAGGAGGTGGTCATCAAGAGGCCTGCCCGTG
GCCAGGGCGGTGCCTATGCCTTCCTCAAGTTCCAGAACCTGGACATGGCCCATAGGGCTAAGGTGGCCAT
GTCGGGCCGAGTGATTGGTCGCAACCCCATTAAGATAGGCTATGGCAAGGCCAACCCCACCACTCGTCTC
TGGGTGGGTGGCCTGGGACCTAACACGTCACTGGCGGCTCTGGCCCGAGAGTTTGACCGCTTTGGGAGCA
TTCGGACCATTGATCACGTCAAAGGAGATAGCTTTGCCTATATTCAGTACGAGAGCTTGGACGCAGCCCA
GGCCGCCTGTGCTAAAATGAGGGGTTTTCCCTTGGGTGGACCAGACCGCAGGCTCCGCGTGGATTTTGCC
AAAGCAGAGGAGACTCGGTACCCCCAGCAGTACCAGCCCTCGCCACTCCCTGTGCATTATGAGCTGCTCA
CAGATGGATACACCCGGCACCGCAACCTGGACGCCGACCTGGTGCGGGACAGGACGCCCCCACACCTTCT
GTACTCAGACCGAGACCGGACTTTTTTGGAAGGGGACTGGACCAGCCCCAGTAAAAGCTCTGACCGCCGA
AACAGCCTTGAGGGCTACAGTCGCTCAGTGCGCAGCCGGAGTGGTGAGCGTTGGGGGGCAGATGGAGACC
GTGGTTTGCCCAAGCCCTGGGAAGAGAGGCGGAAACGGAGAAGCCTTTCCAGTGACCGTGGGAGGACAAC
CCATTCACCATATGAGGAACGGAGTAGGACCAAGGGCAGTGGGCAGCAGTCAGAGCGGGGCTCCGACCGC
ACCCCTGAGCGCAGCCGCAAGGAGAACCACTCCAGTGAAGGGACCAAGGAGTCCAGCAGCAACTCCCTCA
GCAACAGCAGACATGGGGCTGAGGAACGGGGCCACCACCACCACCACCACGAGGCTGCAGACTCTTCCCA
CGGGAAGAAGGCAAGAGACAGCGAGCGCAATCACCGGACCACAGAGGCCGAGCCCAAGCCTCTGGAAGAG
CCAAAACACGAGACCAAAAAGCTGAAGAATCTTTCAGAGTACGCTCAGACACTACAGCTGGGTTGGAATG
GGCTTCTGGTGTTGAAAAACAGCTGCTTCCCCACGTCTATGCATATCCTAGAGGGGGACCAGGGGGTGAT
CAGCAGTCTCCTCAAAGACCACACTTCTGGGAGCAAGCTGACCCAGCTGAAGATCGCCCAGCGCCTTCGA
CTGGACCAGCCCAAGCTTGACGAGGTCACACGACGCATCAAGCAGGGGAGCCCCAACGGCTATGCGGTCC
TCTTAGCCACCCAGGCAACCCCCAGTGGGCTTGGCACTGAGGGGATGCCCACAGTAGAGCCCGGTCTGCA
GAGGCGGCTTCTCAGGAACCTGGTCTCCTACTTGAAACAGAAGCAGGCCGCAGGGGTGATCAGCTTGCCA
GTGGGGGGGTCCAAGGGCAGAGACGGCACAGGCATGCTCTACGCCTTCCCACCCTGCGACTTTTCCCAGC
AGTACCTCCAGTCAGCACTAAGGACATTGGGCAAGCTAGAAGAAGAACACATGGTGATAGTCATCGTCAG
AGACACTGCCTAG

Translation (890 aa):
MKRQSERDSSPSGRGSSSSAKRPREREREAEAGGRRAAHKASGGAKHPVPARARDKPRGSGSGGGGHRDG
RGTGDANHRASSGRSSGSGAGGGGRGGKASGDPGASGMSPRASPLPPPPPPPGAEPACPGSSAAAPEYKT
LLISSLSPALPAEHLEDRLFHQFKRFGEISLRLSHTPELGRVAYVNFRHPQDAREARQHALARQLLLYDR
PLKVEPVYLRGGGGSSRRSSSSSAAASTPPPGPPAPADPLGYLPLHGGYQYKQRSLSPVAAPPLREPRAR
HAAAAFALDAAAAAAVGLSRERALDYYGLYDDRGRPYGYPAVCEEDLMPEDDQRATRNLFIGNLDHSVSE
VELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKVAMSGRVIGRNPIKIGYGKANPTTRL
WVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFA
KAEETRYPQQYQPSPLPVHYELLTDGYTRHRNLDADLVRDRTPPHLLYSDRDRTFLEGDWTSPSKSSDRR
NSLEGYSRSVRSRSGERWGADGDRGLPKPWEERRKRRSLSSDRGRTTHSPYEERSRTKGSGQQSERGSDR
TPERSRKENHSSEGTKESSSNSLSNSRHGAEERGHHHHHHEAADSSHGKKARDSERNHRTTEAEPKPLEE
PKHETKKLKNLSEYAQTLQLGWNGLLVLKNSCFPTSMHILEGDQGVISSLLKDHTSGSKLTQLKIAQRLR
LDQPKLDEVTRRIKQGSPNGYAVLLATQATPSGLGTEGMPTVEPGLQRRLLRNLVSYLKQKQAAGVISLP
VGGSKGRDGTGMLYAFPPCDFSQQYLQSALRTLGKLEEEHMVIVIVRDTA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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