NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS92720.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92720.1 Public Homo sapiens 2 ASXL2 24 110 108 CCDS HistoryNCBI Gene:55252Re-query CCDS DB by CCDS ID:92720.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92720.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000435504.9 ENSP00000391447.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000435504.9Link to Ensembl Protein Viewer:ENSP00000391447.3Re-query CCDS DB by Nucleotide ID:ENST00000435504Re-query CCDS DB by Protein ID:ENSP00000391447
Original member Current member NCBI NM_018263.6 NP_060733.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018263.6Link to Protein Sequence:NP_060733.4Re-query CCDS DB by Nucleotide ID:NM_018263Re-query CCDS DB by Protein ID:NP_060733Link to BLAST:NP_060733.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060733.4 1435 Q76L83-1 1435 100% 0 0

Chromosomal Locations for CCDS 92720.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 25742029 25744476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25749696 25750413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25753534 25753639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25756018 25756114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25759482 25759645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25767583 25767726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25768742 25768868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25771440 25771540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25799385 25799535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25806229 25806337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25835538 25835540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25845481 25845563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25878166 25878222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4308 nt):
ATGAGGGAAAAGGGACGTAGGAAGAAGGGCAGGACCTGGGCGGAGGCCGCCAAGACGGTCTTAGAAAAAT
AC
CCCAATACACCCATGAGTCATAAAGAAATTCTTCAAGTTATCCAGAGAGAAGGACTAAAAGAAATCAG
A
AGTGGGACTTCTCCTCTTGCATGCCTGAATGCAATGCTTCACACAAACTCCAGAGGTGAAGAGGGCATC
TTC
TATAAGGTTCCAGGTAGAATGGGAGTATATACTTTGAAGAAAGATGTGCCGGATGGGGTGAAAGAGC
TG
TCAGAAGGTTCAGAAGAAAGCAGTGATGGTCAGTCAGATTCCCAGAGTTCTGAGAACAGCAGCAGCAG
C
AGTGATGGTGGCAGCAACAAGGAGGGAAAAAAGAGCAGGTGGAAAAGGAAAGTATCGTCGTCCTCCCCG
CAG
TCAGGCTGCCCATCACCCACCATTCCAGCAGGTAAAGTCATTTCTCCATCACAGAAGCACAGCAAGA
AG
GCACTAAAGCAGGCGCTAAAGCAGCAACAGCAGAAGAAGCAGCAGCAGCAATGCAGGCCAAGCATATC
C
ATCTCCTCCAACCAGCATCTCTCACTAAAGACTGTCAAAGCAGCCAGTGACTCTGTACCTGCCAAACCT
G
CA
ACATGGGAAGGAAAGCAATCTGATGGACAGACAGGCAGCCCTCAAAACTCAAACTCCAGCTTTTCTT
CC
TCAGTTAAAGTGGAAAATACTTTACTAGGCTTGGGGAAGAAGTCATTCCAGAGATCTGAGAGACTCCA
T
ACCAGACAAATGAAAAGAACTAAATGTGCTGACATTGACGTTGAGACACCGGACTCCATTCTGGTTAAT
ACA
AATCTGCGAGCACTGATCAACAAGCACACATTTTCAGTCCTTCCTGGAGATTGCCAGCAACGACTGC
TT
TTACTACTCCCAGAGGTAGATCGACAGGTTGGTCCAGATGGTTTAATGAAGTTAAATGGCTCAGCCCT
T
AACAATGAATTCTTCACTTCAGCAGCCCAAGGCTGGAAGGAAAGACTCTCAGAAGGTGAGTTTACACCT
GAG
ATGCAGGTGAGAATTCGACAAGAGATTGAGAAGGAGAAAAAAGTGGAGCCATGGAAAGAACAATTCT
TT
GAAAGCTACTATGGGCAGAGTTCTGGCCTGAGCCTTGAAGATTCTAAGAAATTGACAGCTTCTCCCAG
T
GATCCCAAAGTAAAGAAAACCCCAGCTGAACAACCAAAATCCATGCCTGTGTCAGAGGCCTCTCTTATC
AGA
ATAGTTCCAGTAGTCTCCCAGTCAGAGTGTAAAGAAGAAGCATTGCAAATGTCATCACCAGGCAGAA
AA
GAAGAGTGTGAAAGCCAAGGTGAAGTGCAGCCGAACTTCTCCACATCTTCAGAGCCCCTGCTTTCCTC
A
GCTCTCAATACACATGAGCTTAGCAGCATTCTTCCCATCAAGTGCCCAAAGGATGAGGATCTCTTGGAG
CAG
AAGCCAGTCACCTCTGCTGAACAGGAATCTGAGAAGAACCATCTCACCACAGCTTCTAATTATAACA
AA
AGTGAAAGCCAAGAATCTTTAGTTACATCGCCAAGCAAACCCAAGAGTCCTGGGGTTGAAAAACCAAT
A
GTGAAGCCCACAGCAGGAGCGGGTCCACAGGAGACTAATATGAAAGAACCTCTAGCAACTCTTGTTGAT
CAG
AGCCCAGAAAGCCTCAAGAGGAAGTCTTCCCTCACCCAAGAAGAGGCCCCTGTGAGCTGGGAGAAGA
GG
CCACGTGTCACTGAGAATCGCCAGCACCAGCAGCCATTTCAGGTCTCACCACAGCCCTTTCTCAATAG
A
GGGGACAGAATCCAGGTGCGAAAAGTACCACCTCTCAAGATCCCGGTCTCCAGAATCTCCCCCATGCCG
TTT
CATCCATCGCAGGTCTCTCCCAGGGCTCGTTTTCCAGTCTCCATCACTAGTCCTAACAGAACAGGAG
CC
AGAACTCTTGCAGACATCAAAGCAAAAGCCCAACTGGTCAAAGCACAGAGGGCAGCAGCTGCCGCTGC
C
GCCGCAGCTGCTGCAGCCGCCTCAGTTGGAGGGACCATTCCAGGACCTGGCCCAGGGGGTGGACAAGGT
CCA
GGAGAGGGTGGTGAAGGGCAGACTGCTAGAGGAGGCAGTCCAGGCTCAGACAGAGTCAGTGAAACTG
GA
AAGGGCCCCACACTGGAACTGGCAGGAACTGGAAGCAGGGGAGGTACGAGAGAGCTTTTACCCTGTGG
T
CCAGAGACTCAGCCCCAGTCTGAGACCAAGACCACCCCAAGCCAGGCACAGCCTCATAGTGTCTCTGGA
GCA
CAACTACAGCAAACCCCCCCAGTGCCTCCAACACCTGCCGTCAGTGGAGCATGCACAAGTGTCCCAT
CA
CCAGCCCACATAGAGAAATTGGATAATGAAAAACTGAACCCCACCAGAGCAACAGCCACAGTGGCCTC
T
GTCAGCCATCCACAAGGGCCCAGTAGTTGCAGACAGGAGAAAGCACCTTCTCCAACAGGTCCTGCTCTA
ATC
TCAGGTGCCTCACCTGTTCATTGTGCAGCTGATGGCACAGTTGAGCTCAAAGCAGGTCCTAGTAAGA
AT
ATACCTAACCCTTCAGCCTCATCAAAGACAGATGCTAGTGTGCCAGTGGCTGTAACTCCCTCCCCTTT
A
ACATCTTTATTGACCACAGCCACTTTAGAAAAGCTTCCTGTACCCCAGGTCAGTGCAACTACAGCACCT
GCT
GGATCAGCTCCACCCTCGAGCACTTTGCCAGCAGCTTCTAGCCTTAAAACCCCAGGAACTTCTTTAA
AC
ATGAATGGACCCACTTTAAGACCAACCTCTAGTATCCCTGCTAATAATCCTTTAGTGACTCAGCTGCT
T
CAAGGCAAAGATGTTCCCATGGAGCAAATTCTGCCTAAACCTCTCACCAAAGTTGAAATGAAAACGGTT
CCA
CTGACTGCAAAAGAGGAAAGGGGGATGGGAGCGCTCATAGCTACCAACACAACAGAAAATAGCACCA
GA
GAGGAAGTTAATGAGAGACAGTCCCATCCAGCTACGCAGCAGCAGCTGGGCAAAACCTTGCAAAGTAA
G
CAGCTCCCCCAGGTTCCAAGGCCCCTTCAGCTCTTTTCAGCTAAGGAGCTGAGGGACTCCAGCATTGAC
ACA
CACCAATACCACGAAGGACTAAGTAAAGCAACCCAAGATCAGATCCTTCAGACTCTCATTCAGAGGG
TT
CGGAGGCAGAATCTTCTCTCAGTTGTGCCGCCCTCACAGTTCAACTTCGCTCACTCAGGTTTCCAGCT
G
GAAGACATCTCCACAAGCCAGAGGTTCATGCTGGGTTTTGCTGGCAGAAGGACATCCAAACCTGCAATG
GCA
GGGCACTACTTACTGAATATTTCTACCTACGGCCGGGGCTCAGAGAGCTTTAGGAGGACCCATTCTG
TA
AACCCTGAAGATCGTTTTTGTCTAAGCAGCCCCACTGAAGCCTTGAAAATGGGATATACAGACTGTAA
A
AATGCAACAGGAGAGAGTAGCAGCAGCAAAGAAGATGACACTGATGAGGAAAGTACTGGTGATGAGCAG
GAA
TCTGTCACAGTGAAAGAGGAGCCCCAGGTTTCCCAGAGTGCTGGCAAGGGTGACACAAGTTCAGGAC
CT
CACAGCAGGGAAACTCTATCTACCAGTGATTGCTTAGCTAGCAAGAATGTGAAGGCTGAGATACCATT
G
AATGAGCAAACCACTTTAAGTAAGGAGAATTACCTGTTCACTAGAGGCCAAACATTTGATGAAAAGACC
CTA
GCCAGAGATTTAATTCAGGCAGCACAGAAGCAGATGGCTCATGCAGTGAGAGGTAAGGCAATCCGTA
GC
AGCCCCGAGCTTTTCAGTTCTACTGTTCTTCCTCTGCCTGCAGACAGCCCCACCCACCAGCCCCTACT
C
CTTCCACCCCTGCAAACCCCGAAGTTGTATGGAAGCCCCACCCAGATAGGGCCAAGCTATAGAGGCATG
ATC
AATGTCTCCACCTCATCTGACATGGACCATAACTCTGCTGTACCAGGTAGCCAGGTATCTAGCAATG
TA
GGTGATGTCATGTCATTTTCAGTGACTGTCACTACCATCCCTGCTAGCCAAGCTATGAATCCCAGCAG
C
CATGGCCAGACCATTCCTGTTCAGGCGTTCTCCGAAGAGAACAGCATAGAGGGCACGCCTTCGAAATGT
TAC
TGCCGCTTGAAAGCCATGATCATGTGCAAAGGCTGTGGCGCTTTCTGCCATGATGATTGCATCGGCC
CC
TCCAAACTGTGCGTCTCCTGCCTTGTCGTTCGGTAA


Translation (1435 aa):
MREKGRRKKGRTWAEAAKTVLEKYPNTPMSHKEILQVIQREGLKEIRSGTSPLACLNAMLHTNSRGEEGI
F
YKVPGRMGVYTLK
KDVPDGVKELSEGSEESSDGQSDSQSSENSSSSSDGGSNKEGKKSRWKRKVSSSSP
Q
SGCPSPTIPAGKVISPSQKHSKKALKQ
ALKQQQQKKQQQQCRPSISISSNQHLSLKTVKAASDSVPAKP
A
TWEGKQSDGQTGSPQNSNSSFSSSVKVENTLLGLGKKSFQRSERLHTRQMKRTKCADIDVETPDSILVN
T
NLRALINKHTFSVLPGDCQQRLLLLLPEVDRQ
VGPDGLMKLNGSALNNEFFTSAAQGWKERLSEGEFTP
E
MQVRIRQEIEKEKKVEPWKEQFFESYYGQ
SSGLSLEDSKKLTASPSDPKVKKTPAEQPKSMPVSEASLI
R
IVPVVSQSECKEEALQMSSPGRKEECESQGEVQPNFSTSSEPLLSSALNTHELSSILPIKCPKDEDLLE
Q
KPVTSAEQESEKNHLTTASNYNKSESQESLVTSPSKPKSPGVEKPIVKPTAGAGPQETNMKEPLATLVD
Q
SPESLKRKSSLTQEEAPVSWEKRPRVTENRQHQQPFQVSPQPFLNRGDRIQVRKVPPLK
IPVSRISPMP
F
HPSQVSPRARFPVSITSPNRTGARTLADIKAKAQLVKAQRAAAAAAAAAAAAASVGGTIPGPGPGGGQG
P
GEGGEGQTARGGSPGSDRVSETGKGPTLELAGTGSRGGTRELLPCGPETQPQSETKTTPSQAQPHSVSG
A
QLQQTPPVPPTPAVSGACTSVPSPAHIEKLDNEKLNPTRATATVASVSHPQGPSSCRQEKAPSPTGPAL
I
SGASPVHCAADGTVELKAGPSKNIPNPSASSKTDASVPVAVTPSPLTSLLTTATLEKLPVPQVSATTAP
A
GSAPPSSTLPAASSLKTPGTSLNMNGPTLRPTSSIPANNPLVTQLLQGKDVPMEQILPKPLTKVEMKTV
P
LTAKEERGMGALIATNTTENSTREEVNERQSHPATQQQLGKTLQSKQLPQVPRPLQLFSAKELRDSSID
T
HQYHEGLSKATQDQILQTLIQRVRRQNLLSVVPPSQFNFAHSGFQLEDISTSQRFMLGFAGRRTSKPAM
A
GHYLLNISTYGRGSESFRRTHSVNPEDRFCLSSPTEALKMGYTDCKNATGESSSSKEDDTDEESTGDEQ
E
SVTVKEEPQVSQSAGKGDTSSGPHSRETLSTSDCLASKNVKAEIPLNEQTTLSKENYLFTRGQTFDEKT
L
ARDLIQAAQKQMAHAVRGKAIRSSPELFSSTVLPLPADSPTHQPLLLPPLQTPKLYGSPTQIGPSYRGM
I
NVSTSSDMDHNSAVPGSQVSSNVGDVMSFSVTVTTIPASQAMNPSSHGQTIPVQAFSEENSIEGTPSKC
Y
CRLKAMIMCKGCGAFCHDDCIGPSKLCVSCLVVR




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser