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Report for CCDS7296.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7296.1 Public Homo sapiens 10 MACROH2A2 24 110 108 CCDS HistoryNCBI Gene:55506Re-query CCDS DB by CCDS ID:7296.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7296.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373255.9 ENSP00000362352.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000373255.9Link to Ensembl Protein Viewer:ENSP00000362352.3Re-query CCDS DB by Nucleotide ID:ENST00000373255Re-query CCDS DB by Protein ID:ENSP00000362352
Original member Current member EBI ENST00000679349.1 ENSP00000503835.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000679349.1Link to Ensembl Protein Viewer:ENSP00000503835.1Re-query CCDS DB by Nucleotide ID:ENST00000679349Re-query CCDS DB by Protein ID:ENSP00000503835
Original member Current member NCBI NM_018649.3 NP_061119.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018649.3Link to Protein Sequence:NP_061119.1Re-query CCDS DB by Nucleotide ID:NM_018649Re-query CCDS DB by Protein ID:NP_061119Link to BLAST:NP_061119.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061119.1 372 Q9P0M6 372 100% 0 0

Chromosomal Locations for CCDS 7296.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 70075659 70075830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 70090060 70090166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 70091757 70091954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 70093735 70093845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 70095654 70095753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 70100208 70100297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 70109033 70109207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 70111518 70111683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1119 nt):
ATGTCGGGCCGGAGTGGGAAGAAGAAAATGTCCAAGCTGTCCCGTTCAGCTAGGGCAGGTGTCATCTTTC
CA
GTGGGGAGGCTGATGCGTTATCTGAAGAAAGGGACGTTCAAGTACCGGATCAGCGTGGGCGCCCCTGT
C
TACATGGCGGCAGTCATTGAGTACCTGGCAGCGGAAATTCTAGAATTGGCCGGCAATGCCGCGAGGGAC
AAC
AAGAAGGCCCGGATAGCCCCGAGACACATCTTGCTGGCAGTTGCCAATGACGAGGAGCTCAACCAGC
TG
CTAAAAGGAGTGACCATCGCCAGTGGAGGCGTCCTGCCCAGAATTCACCCCGAACTGCTGGCCAAAAA
G
CGAGGGACCAAAGGCAAGTCGGAAACGATCCTCTCCCCACCCCCAGAGAAAAGAGGCAGGAAGGCCACG
TCA
GGCAAGAAGGGGGGGAAGAAATCCAAGGCTGCCAAACCACGGACGTCCAAAAAGTCCAAACCAAAGG
AC
AGCGATAAAGAAGGAACTTCAAATTCCACCTCTGAAGATGGGCCAGGGGATGGATTCACCATTCTGTC
T
TCTAAGAGCCTTGTTCTGGGACAGAAGCTGTCCTTAACCCAGAGTGACATCAGCCATATTGGCTCCATG
AGA
GTGGAGGGCATTGTCCACCCAACCACAGCCGAAATTGACCTCAAAGAAGATATAGGTAAAGCCTTGG
AA
AAGGCTGGGGGAAAAGAGTTCTTGGAAACGGTAAAGGAGCTTCGCAAATCCCAAGGCCCTTTGGAAGT
C
GCCGAAGCCGCCGTCAGCCAATCCAGTGGACTCGCAGCCAAATTTGTCATCCACTGTCACATCCCTCAG
TGG
GGCTCCGACAAATGTGAAGAACAGCTTGAAGAGACCATCAAAAACTGCCTGTCAGCGGCGGAGGACA
AG
AAGCTAAAGTCCGTCGCGTTCCCGCCTTTCCCCAGCGGCAGAAACTGCTTTCCCAAACAGACTGCGGC
C
CAGGTGACCCTCAAAGCCATCTCAGCCCACTTTGATGACTCGAGCGCGTCCTCGCTGAAGAACGTGTAC
TTC
CTGCTCTTCGACAGCGAGAGCATCGGCATCTACGTGCAGGAGATGGCCAAGCTCGACGCCAAGTAG


Translation (372 aa):
MSGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAAEILELAGNAARD
N
KKARIAPRHILLAVANDEELNQ
LLKGVTIASGGVLPRIHPELLAKKRGTKGKSETILSPPPEKRGRKAT
S
GKKGGKKSKAAKPRTSKK
SKPKDSDKEGTSNSTSEDGPGDGFTILSSKSLVLGQKLSLTQSDISHIGSM
R
VEGIVHPTTAEIDLKEDI
GKALEKAGGKEFLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQ
W
GSDKCEEQLEETIKNCLSAAEDKKLKSVAFPPFPSG
RNCFPKQTAAQVTLKAISAHFDDSSASSLKNVY
F
LLFDSESIGIYVQEMAKLDAK




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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