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Report for CCDS12982.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12982.1 Public Homo sapiens 19 ZNF446 24 110 108 CCDS HistoryNCBI Gene:55663Re-query CCDS DB by CCDS ID:12982.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12982.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000594369.6 ENSP00000472802.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000594369.6Link to Ensembl Protein Viewer:ENSP00000472802.1Re-query CCDS DB by Nucleotide ID:ENST00000594369Re-query CCDS DB by Protein ID:ENSP00000472802
Original member Current member NCBI NM_017908.4 NP_060378.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017908.4Link to Protein Sequence:NP_060378.1Re-query CCDS DB by Nucleotide ID:NM_017908Re-query CCDS DB by Protein ID:NP_060378Link to BLAST:NP_060378.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060378.1 450 Q9NWS9-1 450 100% 0 0

Chromosomal Locations for CCDS 12982.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 58477219 58477560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 58477637 58477826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 58478087 58478181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 58479643 58479727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 58479930 58480019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 58480176 58480726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1353 nt):
ATGCCATCCCCTCTGGGTCCCCCATGCCTGCCCGTCATGGACCCAGAGACCACCCTTGAGGAGCCTGAGA
CTGCCCGCCTCCGCTTCCGAGGGTTCTGCTACCAGGAGGTGGCAGGTCCCCGAGAAGCCCTGGCCCGGCT
GCGTGAGCTGTGTTGCCAGTGGCTGCAGCCTGAGGCACACTCCAAGGAGCAGATGCTGGAGATGCTGGTG
CTGGAGCAGTTCCTGGGCACACTGCCTCCCGAGATCCAGGCCTGGGTGCGCGGTCAGCGGCCAGGCAGTC
CTGAGGAGGCCGCTGCCCTAGTCGAAGGACTGCAGCATGACCCTGGGCAACTGTTGGGCTGGATCACAGC
CCATGTCCTGAAGCAGGAGGTGCTCCCTGCAGCCCAGAAGACAGAGGAACCACTTGGGAGCCCCCACCCC
TCAGGGACAGTGGAGTCCCCTGGGGAAGGTCCCCAGGACACCAGAATAGAGGGGTCTGTCCAGCTCAGCT
GCAGTGTGAAGGAGGAGCCCAATGTCGATGGACAGGAAGTGGCACCCTCCAGCCCTCCACTTGCAGCACA
GTCCCCTGAGGGGAACCATGGACACCAAGAACCAGCCTCCACATCCTTCCACCCACCCAGGATTCAGGAG
GAGTGGGGGCTGCTGGACCGGTCACAGAAGGAACTGTACTGGGATGCGATGCTGGAGAAGTACGGCACAG
TGGTCTCCCTGGGGTTACCGCCCCACCAGCCAGAGGCACAGGCCCAGTCAGAGCTGGGGATGCTGCTCAC
GGGGACAGGCGTCTGCAGAAGCCTGCGCTCGGGAAATGAGAGTGAGGGTCCACCTGGCTGCCCAGAGGCC
CAGCCGCCCCAGGGCCCAGGGCCGGCAGCCTGGGAGGGCTTGTCTGGGGCTGCCACTCCTGCCCCCACTG
TGCGCCCAGGGACACCGCCAGTGCCCACTCAGCCCACACCTGCAGAGACGAGACTGGAGCCGGCTGCCAC
CCCCAGGAAGCCCTACACGTGCGAGCAGTGTGGCCGCGGCTTCGACTGGAAGTCAGTGTTCGTCATCCAC
CACCGGACACACACGAGTGGGCCAGGTGTGCAGTCCCCGGGGCTAGCCACCGGGGAAAGCACAGAGAAGC
CACCACAAGGGGAGGTGGCCTTTCCGCACCACCCCCGACGCTCACTCACAGGCCCCCGGAGTTACCCGTG
TGAGGAGTGCGGGTGCAGCTTCAGCTGGAAGTCGCAGCTGGTCATCCACCGCAAGAGCCACACAGGCCAG
CGGCGTCACTTCTGCAGTGACTGTGGCCGCGCCTTCGACTGGAAGTCGCAGCTGGTCATCCACCGCAAGG
GCCACCGGCCGGAGGTTCCATGA

Translation (450 aa):
MPSPLGPPCLPVMDPETTLEEPETARLRFRGFCYQEVAGPREALARLRELCCQWLQPEAHSKEQMLEMLV
LEQFLGTLPPEIQAWVRGQRPGSPEEAAALVEGLQHDPGQLLGWITAHVLKQEVLPAAQKTEEPLGSPHP
SGTVESPGEGPQDTRIEGSVQLSCSVKEEPNVDGQEVAPSSPPLAAQSPEGNHGHQEPASTSFHPPRIQE
EWGLLDRSQKELYWDAMLEKYGTVVSLGLPPHQPEAQAQSELGMLLTGTGVCRSLRSGNESEGPPGCPEA
QPPQGPGPAAWEGLSGAATPAPTVRPGTPPVPTQPTPAETRLEPAATPRKPYTCEQCGRGFDWKSVFVIH
HRTHTSGPGVQSPGLATGESTEKPPQGEVAFPHHPRRSLTGPRSYPCEECGCSFSWKSQLVIHRKSHTGQ
RRHFCSDCGRAFDWKSQLVIHRKGHRPEVP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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