NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS37555.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37555.1 Public Mus musculus 17 Akap8 23 108 98 CCDS HistoryNCBI Gene:56399Re-query CCDS DB by CCDS ID:37555.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37555.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000002699.6 ENSMUSP00000002699.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000002699.6Link to Ensembl Protein Viewer:ENSMUSP00000002699.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000002699Re-query CCDS DB by Protein ID:ENSMUSP00000002699
Original member Current member NCBI NM_019774.5 NP_062748.2 Accepted alive Link to Nucleotide Sequence:NM_019774.5Link to Protein Sequence:NP_062748.2Re-query CCDS DB by Nucleotide ID:NM_019774Re-query CCDS DB by Protein ID:NP_062748Link to BLAST:NP_062748.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_062748.2 687 Q9DBR0 687 100% 0 0

Chromosomal Locations for CCDS 37555.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 32305257 32305706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32306490 32306585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32309419 32309549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32310578 32310671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32310953 32311094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32312286 32312373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32314111 32314144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32315442 32315488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32315655 32315784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32316187 32316667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32317067 32317346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32317846 32317878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32318771 32318809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32321085 32321103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2064 nt):
ATGGAGCAAGGCTACGGAGGCTATGGGGCATGGAGTGCTGGACCTGCCAACACCCAGGGTACATATGGAA
GTGGTATGACCAGCTGGCAAGGTTATGAAAACTACAACTACTACAATGCCCAGAACACCAGTGTCCCTGC
AGGAACACCCTATAGTTACGGCCCAGCCTCATGGGAGGCCACCAAGACCAATGATGGTGGCCTGGCAGCT
GGGAGCCCTGCCATGCATGTGGCGTCTTTTGCCCCAGAGCCATGTACCGACAACTCAGACTCGCTCATTG
CCAAGATCAATCAACGTTTGGACATGTTGTCTAAGGAAGGAGGCAGGGGTGGGATCAGCAGCGGTGGGGA
GGGCGTGCAGGACCGAGACAGCTCCTTCCGCTTCCAGCCATACGAGTCCTACGACGCCAGGCCCTGTATA
CCTGAGCATAATCCCTACCGCCCCGGCTACGGTTATGATTATGACTTTGACTTGGGAACTGACCGCAATG
GTAGCTTTGGTGGGACATTCAACGACTGTCGGGACCCAGCCCCAGAGCGGGGCTCCCTTGATGGTTTCTT
GAGGGGCCGGGGCCAGGGCCGCTTCCAAGACCGGAGCAACTCCAGCACCTTCATACGTAGTGACCCTTTC
ATGCCACCCTCAGCCTCGGAGCCCTTATCCACTACGTGGAATGAGCTGAACTACATGGGTGGCCGTGGTC
TCGGTGGGCCCTCCACCAGCAGGCCACCTCCTTCCCTCTTCTCCCAGTCCATGGCCCCTGACTACAGCAT
GATGGGCATGCAGGGGGTGGGCGGTTTTGGTGGTACCATGCCTTACGGATGTGGCCGGTCCCAGACGCGG
ATACGGGATTGGCCTAGAAGGAGGGGGTTTGAACGCTTTGGACCAGACAACATGGGCAGGAAGCGGAAGC
AGTTTCCATTGTATGAAGAACCTGATGCCAAACTGGCCCGTGCTGACAGTGACGGAGATCTGTCTGAAAA
CGATGATGGAGCTGGTGACTTAAGATCAGGAGATGAAGAATTCAGGGGGGAGGATGACTTGTGTGACTCC
AGGAAGCAGAGAGGAGAAAAGGAGGACGAGGATGAGGATGTGAAGAAGAGACGGGAGAAACAAAGGAGGA
GAGACAGGATGCGGGACCGAGCAGCTGACAGGATTCAGTTTGCCTGTTCTGTATGCAAGTTTCGTAGCTT
TGAAGATGAAGAAATTCAAAAGCATCTGCAAAGTAAATTTCACAAAGAGACTTTGCGATTTATAAGTACC
AAACTGCCCGACAAGACAGTAGAATTCCTCCAGGAGTACATCATAAACAGGAATAAGAAAATTGAGAAAC
GGCGTCAGGAGTTGTTGGAGAAGGAGAGCCCTAAACCCAAACCAGATCCATTCAAAGGCATTGGCCAGGA
GCATTTCTTCAAAAAGATTGAAGCCGCACATTGCCTAGCCTGTGACATGCTGATTCCTGCGCAGCATCAG
CTTCTCCAGCGGCATCTGCATTCCGTGGACCATAACCATAATCGAAGGTTGGCTGCTGAGCAGTTCAAGA
AAACAAGTCTCCATGTGGCTAAGAGTGTTTTGAACAACAAACATATAGTGAAGATGCTGGAAAAATACCT
CAAGGGTGAGGATCCTTTTGTCAATGAAACTGCTGACCTTGAGACAGAAGGAGATGAAAATGTAGGAGAG
GAGAAGGAGGAGACACCAGAGGAGGTAGCTGCCGAAGTCTTAGCAGAGGTGATCACAGCAGCAGTGAAGG
CTGTAGAGGGGGAAGGAGAACCTGCTGCAGCGCATAGTGACGTCCTAACTGAAGTGGAAGGGCCTGTGGA
CACAGCAGAGGCCAGCAGTGACCCCCACACTGAAAAGCTACTAGAAGAGCAGACCTGTGAAGCAGCATCT
GAAACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTGAGGCCAGAAACGAAGCAGCTATGCCAA
CAGCAGACGCAGGAAGCACGTTACCTGTCATAGCAATCCCGGGAATCATGGAAGATGAGCTGGAACAAAC
TGGTGCAGAGGCCAAAGATATTCCCACCGAATGA

Translation (687 aa):
MEQGYGGYGAWSAGPANTQGTYGSGMTSWQGYENYNYYNAQNTSVPAGTPYSYGPASWEATKTNDGGLAA
GSPAMHVASFAPEPCTDNSDSLIAKINQRLDMLSKEGGRGGISSGGEGVQDRDSSFRFQPYESYDARPCI
PEHNPYRPGYGYDYDFDLGTDRNGSFGGTFNDCRDPAPERGSLDGFLRGRGQGRFQDRSNSSTFIRSDPF
MPPSASEPLSTTWNELNYMGGRGLGGPSTSRPPPSLFSQSMAPDYSMMGMQGVGGFGGTMPYGCGRSQTR
IRDWPRRRGFERFGPDNMGRKRKQFPLYEEPDAKLARADSDGDLSENDDGAGDLRSGDEEFRGEDDLCDS
RKQRGEKEDEDEDVKKRREKQRRRDRMRDRAADRIQFACSVCKFRSFEDEEIQKHLQSKFHKETLRFIST
KLPDKTVEFLQEYIINRNKKIEKRRQELLEKESPKPKPDPFKGIGQEHFFKKIEAAHCLACDMLIPAQHQ
LLQRHLHSVDHNHNRRLAAEQFKKTSLHVAKSVLNNKHIVKMLEKYLKGEDPFVNETADLETEGDENVGE
EKEETPEEVAAEVLAEVITAAVKAVEGEGEPAAAHSDVLTEVEGPVDTAEASSDPHTEKLLEEQTCEAAS
ETRSIEDKTRGEAAEARNEAAMPTADAGSTLPVIAIPGIMEDELEQTGAEAKDIPTE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH