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Report for CCDS4455.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4455.1 Public Homo sapiens 5 CNOT6 24 110 108 CCDS HistoryNCBI Gene:57472Re-query CCDS DB by CCDS ID:4455.1See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4455.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000261951.9 ENSP00000261951.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000261951.9Link to Ensembl Protein Viewer:ENSP00000261951.4Re-query CCDS DB by Nucleotide ID:ENST00000261951Re-query CCDS DB by Protein ID:ENSP00000261951
Original member Current member EBI ENST00000393356.7 ENSP00000377024.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393356.7Link to Ensembl Protein Viewer:ENSP00000377024.1Re-query CCDS DB by Nucleotide ID:ENST00000393356Re-query CCDS DB by Protein ID:ENSP00000377024
Original member Current member EBI ENST00000618123.4 ENSP00000481893.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000618123.4Link to Ensembl Protein Viewer:ENSP00000481893.1Re-query CCDS DB by Nucleotide ID:ENST00000618123Re-query CCDS DB by Protein ID:ENSP00000481893
Original member Current member NCBI NM_001370472.1 NP_001357401.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001370472.1Link to Protein Sequence:NP_001357401.1Re-query CCDS DB by Nucleotide ID:NM_001370472Re-query CCDS DB by Protein ID:NP_001357401Link to BLAST:NP_001357401.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001357401.1 557 Q9ULM6 557 100% 0 0

Chromosomal Locations for CCDS 4455.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 180529277 180529388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 180549931 180550117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 180553386 180553471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 180564489 180564593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 180564675 180564743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 180565820 180565977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 180567088 180567242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 180567849 180568003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 180569110 180569340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 180571230 180571432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 180573988 180574200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1674 nt):
ATGCCCAAAGAAAAATACGAGCCCCCTGACCCTCGGAGGATGTATACAATTATGTCTTCTGAGGAAGCAG
CAAATGGAAAGAAATCCCACTGGGCAGAGCTTGAAATAAGTGGAAAAGTAAGAAGCTTAAGCGCATCTTT
GTGGTCACTAACTCACCTGACAGCTTTGCATTTGAGTGACAATTCCCTGTCCCGAATTCCTTCAGACATT
GCCAAGCTTCACAATCTGGTGTATTTGGACCTGTCATCTAATAAAATTCGTAGCTTACCCGCAGAACTCG
GAAACATGGTATCACTCAGGGAGCTCCATTTAAATAACAACCTGTTACGAGTTCTACCTTTTGAGCTGGG
AAAACTGTTTCAGTTGCAGACTTTAGGCCTGAAAGGAAATCCCCTTACCCAGGATATATTGAACCTTTAT
CAGGAACCAGATGGAACAAGACGGCTGCTGAACTATTTGCTTGATAATTTGTCAGGTACTGCAAAAAGAA
TTACAACAGAACAACCACCTCCAAGGTCTTGGATTATGTTACAAGAACCAGATAGGACAAGGCCAACTGC
CTTGTTTTCTGTCATGTGCTATAATGTTCTTTGTGATAAATATGCGACCCGGCAGTTATACGGCTACTGT
CCATCATGGGCGCTAAACTGGGACTACAGGAAAAAGGCCATTATTCAAGAAATCTTGAGCTGCAATGCTG
ATATCGTAAGTCTTCAGGAGGTTGAAACGGAACAGTATTACAGTTTTTTTCTGGTAGAGCTGAAAGAACG
TGGCTATAATGGATTCTTCAGTCCTAAGTCTAGAGCTAGGACAATGTCAGAACAAGAAAGGAAACATGTT
GATGGCTGTGCAATATTCTTCAAGACAGAAAAATTTACTTTGGTTCAGAAACACACTGTTGAATTTAATC
AGCTAGCCATGGCAAATTCTGAGGGGTCTGAAGCTATGCTGAACAGAGTCATGACAAAAGATAACATTGG
GGTTGCAGTACTGCTAGAACTTCGGAAGGAATCGATTGAAATGCCGTCCGGAAAGCCACATCTTGGAACA
GAAAAACAACTTATTCTTGTGGCTAACGCCCACATGCATTGGGACCCTGAATACTCTGATGTGAAGTTGG
TACAAACTATGATGTTCCTCTCAGAAGTGAAGAACATTATTGATAAAGCCTCTCGCAACCTCAAATCCAG
TGTTTTGGGAGAATTTGGAACTATTCCACTTGTGTTATGTGCAGATCTTAATTCTTTGCCAGACTCTGGT
GTTGTAGAATATTTGAGCACAGGTGGAGTAGAAACAAATCACAAAGACTTTAAGGAGTTGAGGTATAATG
AAAGTCTCACAAACTTCAGCTGTCATGGGAAGAATGGAACCACCAATGGAAGGATCACTCATGGTTTCAA
GTTACAGAGTGCCTATGAGAGTGGCCTGATGCCTTACACGAATTACACATTTGATTTCAAGGGTATAATA
GACTACATTTTCTATTCTAAACCTCAGCTGAACACCTTAGGCATCCTGGGCCCTCTGGACCACCACTGGC
TGGTTGAGAATAACATCAGTGGCTGCCCGCACCCCCTCATCCCCTCTGACCACTTCTCACTTTTTGCACA
ACTGGAGCTCTTACTGCCTTTCCTGCCCCAAGTCAACGGCATCCACCTTCCTGGCAGGAGGTAG

Translation (557 aa):
MPKEKYEPPDPRRMYTIMSSEEAANGKKSHWAELEISGKVRSLSASLWSLTHLTALHLSDNSLSRIPSDI
AKLHNLVYLDLSSNKIRSLPAELGNMVSLRELHLNNNLLRVLPFELGKLFQLQTLGLKGNPLTQDILNLY
QEPDGTRRLLNYLLDNLSGTAKRITTEQPPPRSWIMLQEPDRTRPTALFSVMCYNVLCDKYATRQLYGYC
PSWALNWDYRKKAIIQEILSCNADIVSLQEVETEQYYSFFLVELKERGYNGFFSPKSRARTMSEQERKHV
DGCAIFFKTEKFTLVQKHTVEFNQLAMANSEGSEAMLNRVMTKDNIGVAVLLELRKESIEMPSGKPHLGT
EKQLILVANAHMHWDPEYSDVKLVQTMMFLSEVKNIIDKASRNLKSSVLGEFGTIPLVLCADLNSLPDSG
VVEYLSTGGVETNHKDFKELRYNESLTNFSCHGKNGTTNGRITHGFKLQSAYESGLMPYTNYTFDFKGII
DYIFYSKPQLNTLGILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLELLLPFLPQVNGIHLPGRR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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