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Report for CCDS32600.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32600.1 Public Homo sapiens 17 NUFIP2 24 110 108 CCDS HistoryNCBI Gene:57532Re-query CCDS DB by CCDS ID:32600.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32600.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000225388.9 ENSP00000225388.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000225388.9Link to Ensembl Protein Viewer:ENSP00000225388.3Re-query CCDS DB by Nucleotide ID:ENST00000225388Re-query CCDS DB by Protein ID:ENSP00000225388
Original member Current member NCBI NM_020772.3 NP_065823.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020772.3Link to Protein Sequence:NP_065823.1Re-query CCDS DB by Nucleotide ID:NM_020772Re-query CCDS DB by Protein ID:NP_065823Link to BLAST:NP_065823.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065823.1 695 Q7Z417-1 695 100% 0 0

Chromosomal Locations for CCDS 32600.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 29264539 29264591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 29267498 29267530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 29285992 29287716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 29293783 29294059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2088 nt):
ATGGAGGAGAAGCCCGGCCAGCCACAGCCTCAGCACCATCACAGCCACCACCATCCGCACCATCACCCTC
AGCAGCAGCAGCAGCAGCCGCACCACCACCACCATTATTATTTCTACAACCACAGCCACAACCACCACCA
CCACCATCATCACCAGCAGCCTCACCAATACCTGCAGCATGGAGCCGAGGGCAGCCCCAAGGCCCAGCCA
AAGCCGCTGAAACATGAGCAGAAACACACCCTCCAGCAGCACCAGGAAACGCCGAAGAAGAAAACAGGCT
ATGGTGAACTAAACGGTAATGCTGGAGAAAGAGAAATATCTTTAAAGAACCTGAGTTCTGATGAAGCCAC
CAACCCTATTTCCAGGGTCCTCAATGGCAACCAGCAAGTTGTAGACACTAGCCTGAAGCAGACTGTAAAG
GCCAACACCTTTGGGAAAGCAGGAATTAAAACCAAGAATTTCATTCAGAAAAACAGTATGGACAAAAAGA
ATGGGAAGTCTTATGAAAATAAATCTGGAGAGAATCAGTCTGTAGATAAGTCTGATACTATACCAATTCC
AAATGGTGTGGTAACAAATAATTCTGGTTATATTACTAATGGTTATATGGGTAAAGGAGCAGATAATGAT
GGTAGTGGATCTGAGAGCGGATATACAACTCCTAAAAAAAGGAAAGCTAGGCGCAATAGTGCCAAGGGTT
GTGAAAACCTTAATATAGTGCAGGACAAAATAATGCAACAAGAGACCAGTGTCCCAACCTTAAAACAGGG
ACTTGAAACTTTCAAGCCTGACTATAGTGAACAAAAGGGAAATCGAGTAGATGGTTCGAAGCCCATTTGG
AAGTATGAAACTGGGCCTGGAGGAACAAGTCGAGGAAAACCTGCTGTGGGTGATATGCTTCGGAAAAGCT
CAGATAGTAAACCTGGTGTGAGCAGCAAAAAGTTTGATGATCGGCCCAAAGGAAAGCATGCTTCAGCTGT
TGCCTCCAAAGAGGACTCGTGGACCCTATTTAAACCACCCCCAGTTTTTCCAGTGGACAATAGCAGTGCT
AAAATAGTTCCTAAAATAAGTTATGCAAGCAAAGTTAAGGAAAACCTCAACAAAACTATACAGAACTCTT
CTGTGTCACCAACTTCATCTTCATCATCTTCATCATCTACCGGGGAAACTCAGACCCAATCATCAAGTCG
CTTATCCCAGGTCCCTATGTCAGCGCTGAAATCTGTTACTTCTGCCAACTTTTCTAATGGGCCTGTTTTA
GCAGGGACTGATGGAAATGTTTATCCTCCAGGGGGTCAGCCACTGCTAACTACTGCTGCTAATACTCTAA
CACCCATCTCTTCTGGGACAGATTCAGTTCTCCAGGACATGAGTCTAACTTCAGCAGCTGTTGAACAAAT
TAAGACTAGCCTTTTTATCTATCCTTCAAATATGCAAACTATGCTGTTGAGCACAGCACAAGTGGATCTG
CCCTCTCAGACAGATCAGCAAAACCTGGGGGATATCTTCCAGAATCAGTGGGGTTTATCATTTATAAATG
AGCCCAGTGCTGGCCCTGAGACTGTTACTGGGAAGTCATCAGAGCATAAAGTGATGGAGGTGACATTTCA
AGGAGAATATCCTGCTACTTTGGTTTCACAGGGTGCTGAAATAATTCCCTCAGGAACTGAGCATCCTGTG
TTTCCCAAGGCTTACGAGCTGGAGAAACGGACTAGTCCTCAAGTTCTGGGTAGCATTCTAAAATCTGGGA
CTACTAGTGAGAGTGGAGCCTTATCCTTGGAACCCAGTCATATAGGTGACCTGCAGAAAGCAGACACCAG
TAGTCAAGGTGCTTTAGTGTTTCTCTCAAAGGACTACGAGATAGAAAGTCAAAATCCTCTGGCCTCTCCT
ACGAACACTTTGTTAGGCTCTGCCAAAGAACAGAGATACCAGAGAGGCCTAGAAAGGAATGATAGCTGGG
GTTCTTTTGACCTGAGGGCTGCTATTGTATATCACACTAAAGAAATGGAATCTATTTGGAATTTGCAGAA
GCAAGATCCCAAAAGGATAATCACTTACAATGAAGCCATGGATAGTCCAGATCAATGA

Translation (695 aa):
MEEKPGQPQPQHHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQHGAEGSPKAQP
KPLKHEQKHTLQQHQETPKKKTGYGELNGNAGEREISLKNLSSDEATNPISRVLNGNQQVVDTSLKQTVK
ANTFGKAGIKTKNFIQKNSMDKKNGKSYENKSGENQSVDKSDTIPIPNGVVTNNSGYITNGYMGKGADND
GSGSESGYTTPKKRKARRNSAKGCENLNIVQDKIMQQETSVPTLKQGLETFKPDYSEQKGNRVDGSKPIW
KYETGPGGTSRGKPAVGDMLRKSSDSKPGVSSKKFDDRPKGKHASAVASKEDSWTLFKPPPVFPVDNSSA
KIVPKISYASKVKENLNKTIQNSSVSPTSSSSSSSSTGETQTQSSSRLSQVPMSALKSVTSANFSNGPVL
AGTDGNVYPPGGQPLLTTAANTLTPISSGTDSVLQDMSLTSAAVEQIKTSLFIYPSNMQTMLLSTAQVDL
PSQTDQQNLGDIFQNQWGLSFINEPSAGPETVTGKSSEHKVMEVTFQGEYPATLVSQGAEIIPSGTEHPV
FPKAYELEKRTSPQVLGSILKSGTTSESGALSLEPSHIGDLQKADTSSQGALVFLSKDYEIESQNPLASP
TNTLLGSAKEQRYQRGLERNDSWGSFDLRAAIVYHTKEMESIWNLQKQDPKRIITYNEAMDSPDQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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