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Report for CCDS45855.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45855.1 Public Homo sapiens 18 KIAA1328 24 110 108 CCDS HistoryNCBI Gene:57536Re-query CCDS DB by CCDS ID:45855.1See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45855.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000280020.10 ENSP00000280020.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000280020.10Link to Ensembl Protein Viewer:ENSP00000280020.5Re-query CCDS DB by Nucleotide ID:ENST00000280020Re-query CCDS DB by Protein ID:ENSP00000280020
Original member Current member NCBI NM_020776.3 NP_065827.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020776.3Link to Protein Sequence:NP_065827.1Re-query CCDS DB by Nucleotide ID:NM_020776Re-query CCDS DB by Protein ID:NP_065827Link to BLAST:NP_065827.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065827.1 577 Q86T90-1 577 100% 0 0

Chromosomal Locations for CCDS 45855.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 36829139 36829196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36834320 36834355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36835234 36835376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36844208 36844302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36885557 36885672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36959308 36959435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37066890 37067545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37160200 37160381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37172973 37173081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37222017 37222227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1734 nt):
ATGGCGGACGTGGCGGGCCCCTCCCGCCCCAGTGCCGCGGCGTTCTGGAGCCGGGACTTTTCTGATGAAG
AACAATCAGTAGTATACGTTCCAGGAATTTCTGCTGAAGGAAATGTCAGATCAAGACACAAGCTGATGAG
TCCAAAAGCTGATGTTAAACTTAAGACTTCCAGGGTGACTGATGCTTCAATCTCCATGGAGTCCTTAAAA
GGCACAGGAGATTCAGTAGATGAACAGAATTCCTGCAGGGGAGAAATAAAGAGTGCATCATTGAAGGATT
TATGTCTTGAAGACAAAAGACGCATTGCAAACTTAATTAAAGAACTGGCCAGAGTAAGTGAGGAAAAGGA
AGTGACAGAGGAAAGACTGAAAGCTGAGCAGGAGTCATTTGAGAAGAAGATCAGGCAGTTGGAAGAACAG
AATGAACTGATCATCAAAGAAAGGGAAGCTCTTCAGCTACAGTATAGAGAATGCCAAGAACTTCTAAGCC
TGTATCAGAAATATTTATCAGAACAACAGGAGAAGCTCACCATGTCTCTCTCAGAACTTGGTGCTGCTAG
AATGCAGGAACAGCAGGTATCCAGTAGAAAAAGCACTCTCCAGTGTTCATCTGTGGAACTGGATGGTTCC
TACTTGAGCATAGCCAGACCACAGACCTACTATCAAACCAAGCAAAGACCTAAGTCTGCAGTCCAGGATT
CAGCTTCAGAATCCCTTATAGCATTTAGGAATAATTCTTTGAAACCAGTAACCCTTCATCATCCCAAAGA
TGATCTAGATAAGATACCATCAGAGACCACAACATGTAATTGTGAATCTCCAGGGAGAAAACCTGCAGTC
CCAACAGAGAAAATGCCACAAGAAGAATTGCACATGAAGGAATGTCCACATCTTAAGCCTACTCCTAGTC
AATGCTGTGGTCATAGACTTGCTGCAGATCGTGTTCATGACAGCCATCCTACAAACATGACCCCTCAACA
TCCTAAGACACATCCAGAATCATGCAGTTATTGTCGGCTTTCTTGGGCATCTCTGGTGCATGGTGGTGGG
GCACTGCAACCCATTGAAACTTTGAAAAAGCAGATCTCAGAAGATAGAAAGCAGCAACTGATGCTTCAGA
AAATGGAACTGGAAATTGAAAAGGAGCGCCTTCAGCATCTGCTGGCCCAGCAGGAGACAAAGCTTCTTCT
AAAACAGCAGCAGCTTCACCAGTCTCGACTGGATTACAATTGTTTATTGAAGTCAAACTGTGATGGCTGG
CTGCTTGGAACATCATCATCTATTAAAAAGCACCAAGACCCCCCAAACAGTGGAGAGAATAGGAAGGAGA
GGAAGACAGTTGGGTTTCATTCGCATATGAAAGATGATGCCCAGTGGTCATGTCAAAAGAAAGATACATG
TAGACCCCAAAGAGGGACAGTGACAGGAGTTAGAAAAGATGCGTCTACATCTCCTATGCCAACAGGAAGC
CTAAAGGATTTTGTCACCACAGCCTCACCATCATTACAGCACACCACCTCCCGGTATGAGACATCTTTGT
TGGATTTGGTTCAGTCTCTGAGCCCAAACTCTGCGCCCAAACCTCAGCGCTATCCCTCCAGAGAAGCTGG
GGCCTGGAATCATGGTACTTTCCGACTCAGTCCTCTAAAATCAACCCGGAAGAAGATGGGGATGCACAGA
ACCCCTGAAGAGTTGGAGGAGAATCAGATTCTGGAAGATATATTTTTCATTTGA

Translation (577 aa):
MADVAGPSRPSAAAFWSRDFSDEEQSVVYVPGISAEGNVRSRHKLMSPKADVKLKTSRVTDASISMESLK
GTGDSVDEQNSCRGEIKSASLKDLCLEDKRRIANLIKELARVSEEKEVTEERLKAEQESFEKKIRQLEEQ
NELIIKEREALQLQYRECQELLSLYQKYLSEQQEKLTMSLSELGAARMQEQQVSSRKSTLQCSSVELDGS
YLSIARPQTYYQTKQRPKSAVQDSASESLIAFRNNSLKPVTLHHPKDDLDKIPSETTTCNCESPGRKPAV
PTEKMPQEELHMKECPHLKPTPSQCCGHRLAADRVHDSHPTNMTPQHPKTHPESCSYCRLSWASLVHGGG
ALQPIETLKKQISEDRKQQLMLQKMELEIEKERLQHLLAQQETKLLLKQQQLHQSRLDYNCLLKSNCDGW
LLGTSSSIKKHQDPPNSGENRKERKTVGFHSHMKDDAQWSCQKKDTCRPQRGTVTGVRKDASTSPMPTGS
LKDFVTTASPSLQHTTSRYETSLLDLVQSLSPNSAPKPQRYPSREAGAWNHGTFRLSPLKSTRKKMGMHR
TPEELEENQILEDIFFI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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