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Report for CCDS47155.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47155.1 Public Homo sapiens 4 FNIP2 24 110 108 CCDS HistoryNCBI Gene:57600Re-query CCDS DB by CCDS ID:47155.1See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47155.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000264433.11 ENSP00000264433.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000264433.11Link to Ensembl Protein Viewer:ENSP00000264433.6Re-query CCDS DB by Nucleotide ID:ENST00000264433Re-query CCDS DB by Protein ID:ENSP00000264433
Original member Current member NCBI NM_020840.3 NP_065891.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020840.3Link to Protein Sequence:NP_065891.1Re-query CCDS DB by Nucleotide ID:NM_020840Re-query CCDS DB by Protein ID:NP_065891Link to BLAST:NP_065891.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065891.1 1114 Q9P278-1 1114 100% 0 0

Chromosomal Locations for CCDS 47155.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 158769213 158769319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 158825916 158826042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 158829079 158829225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 158831861 158831961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 158832067 158832138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 158833528 158833628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 158835405 158835476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 158851321 158851450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 158859057 158859258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 158859578 158859666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 158861342 158861488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 158861607 158861776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 158868102 158869428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 158870313 158870469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 158891446 158891646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 158895750 158895865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 158904466 158904544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3345 nt):
ATGGCCCCGACCCTGCTCCAGAAGCTCTTCAACAAAAGGGGCAGCAGCGGCAGCTCCGCGGCGGCGTCTG
CCCAGGGCAGGGCTCCTAAGGAAGGACCCGCCTTTAGTTGGTCATGTTCGGAGTTTGACCTGAATGAGAT
TCGCCTGATAGTTTACCAGGACTGTGACAGGAGAGGCAGACAAGTCTTGTTTGACTCTAAAGCTGTTCAA
AAGATTGAGGAGGTGACAGCTCAGAAAACAGAGGATGTTCCTATTAAAATATCAGCCAAGTGCTGCCAGG
GAAGCAGCAGTGTCAGCAGCAGTAGCAGCAGCAGCATCTCTTCCCACAGTTCTTCTGGGGGATCTTCACA
TCATGCTAAGGAACAGCTTCCAAAGTACCAGTACACAAGACCAGCTTCCGATGTCAACATGTTAGGGGAA
ATGATGTTTGGCTCAGTTGCCATGAGTTACAAAGGCTCCACCTTAAAGATACACTACATACGTTCTCCTC
CACAACTGATGATTAGTAAAGTCTTCTCTGCTAGAATGGGCAGCTTCTGTGGAAGTACAAATAACTTGCA
AGACAGCTTTGAGTACATCAACCAAGATCCTAATTTGGGAAAACTGAACACAAATCAAAATAGTTTGGGT
CCTTGTCGTACTGGAAGTAACCTAGCACACAGCACACCAGTTGATATGCCAAGCAGAGGACAGAATGAAG
ACAGGGACAGTGGCATTGCTCGATCAGCCTCACTAAGCAGTCTTTTGATCACACCTTTCCCATCTCCAAG
CTCCTCTACATCTTCTTCCAGCAGTTACCAGCGCCGCTGGCTTCGAAGTCAGACAACAAGTTTGGAAAAT
GGCATCATCCCAAGAAGGTCAACTGATGAGACATTCAGCTTGGCTGAAGAAACCTGTAGCTCTAATCCAG
CTATGGTTAGGAGGAAGAAAATTGCCATAAGCATCATCTTTTCCCTATGTGAGAAAGAAGAAGCACAAAG
GAATTTCCAGGACTTCTTCTTTTCTCATTTTCCCCTGTTTGAATCTCACATGAACAGGCTGAAGAGTGCA
ATTGAAAAGGCTATGATCTCCTGTAGGAAAATAGCAGAATCAAGTCTCCGAGTCCAGTTTTATGTCAGCC
GTTTGATGGAAGCTCTGGGAGAATTCAGAGGAACTATCTGGAACTTATATTCTGTTCCAAGGATAGCTGA
ACCTGTATGGCTTACTATGATGTCCGGCACTTTGGAAAAAAACCAGCTCTGCCAGCGCTTTCTCAAGGAG
TTTACACTTCTGATAGAACAGATAAATAAAAACCAGTTTTTTGCTGCCTTACTGACTGCGGTGTTAACCT
ACCACCTGGCCTGGGTCCCAACTGTCATGCCTGTGGATCACCCTCCCATCAAAGCCTTCTCAGAGAAACG
TACCTCCCAGTCAGTGAACATGCTGGCCAAAACACATCCGTATAATCCTCTTTGGGCACAGCTGGGTGAT
CTTTACGGAGCCATAGGCTCTCCAGTGAGACTGACTCGCACCGTAGTGGTAGGGAAGCAGAAGGACTTAG
TCCAGCGAATACTTTATGTCCTGACCTACTTTCTCCGTTGCTCTGAGCTACAAGAGAACCAGCTGACCTG
GAGTGGCAATCATGGTGAAGGTGACCAAGTTTTAAATGGGAGCAAGATCATAACAGCCTTGGAGAAAGGA
GAGGTGGAGGAGTCTGAGTATGTGGTCATTACGGTGAGGAACGAGCCCGCTCTTGTACCCCCCATCCTAC
CACCAACAGCAGCAGAGAGACACAACCCCTGGCCGACAGGGTTTCCTGAGTGCCCAGAGGGCACTGACAG
TAGAGACCTGGGTCTTAAACCTGACAAAGAAGCTAACAGGAGGCCAGAGCAGGGTTCTGAGGCTTGCAGC
GCAGGGTGCCTGGGGCCAGCATCAGACGCTTCCTGGAAACCTCAGAATGCATTTTGTGGGGATGAGAAAA
ATAAAGAGGCACCGCAAGATGGCTCTTCAAGACTTCCCAGCTGTGAAGTTTTGGGGGCAGGAATGAAGAT
GGACCAGCAAGCTGTCTGTGAGCTGTTGAAAGTGGAGATGCCTACAAGACTGCCAGACCGGTCAGTGGCC
TGGCCTTGCCCTGACAGACATCTCCGGGAGAAACCTTCCTTAGAAAAGGTCACTTTCCAGATTGGAAGCT
TTGCATCTCCAGAGTCTGACTTTGAAAGCCGCATGAAAAAAATGGAGGAACGGGTGAAGGCCTGTGGCCC
CTCCTTGGAGGCCAGTGAGGCTGCTGATGTGGCTCAGGACCCGCAGGTTTCTAGGAGCCCTTTTAAACCT
GGCTTTCAGGAGAATGTTTGCTGTCCTCAGAATCGGCTTTCAGAGGGGGATGAAGGCGAGTCTGACAAGG
GTTTTGCAGAGGACAGAGGCAGCAGAAACGACATGGCAGCAGATATTGCTGGGCAGCTCAGCCACGCTGC
TGACTTGGGCACAGCCTCCCACGGTGCAGGAGGAACGGGAGGGAGGAGGCTGGAGGCCACTAGAGGTTTG
TATGTGAAGGCTGCGGAAGGACCTGTGCTGGAGCCTGTTGCCCCCAGGTGTGTCCAGCGGGGCCCTGGCC
TCGTGGCTGGTGCGAATATCCCCTGTGGGGATGACAACAAGAAGGCCAACTTCAGGACTGAAGGAGACAT
TCCCCGAAATGAAAGCTCAGATAGCGCCCTGGGAGACAGTGACGACGAAGCCTGCGCTTCAGCCATGCTA
GATCTGGGTCACGGTGGTGACAGGACTGGAGGGTCCTTGGAAGTGGAGCTGCCTCTGCCAAGGTCTCAGA
GCATCAGCACCCAGAATGTAAGGAACTTTGGCCGCTCACTTCTGGCGGGCTACTGCCCCACATACATGCC
TGATCTTGTGCTTCATGGGACCGGCAGTGATGAGAAGCTGAAGCAGTGCCTGGTGGCCGACCTTGTCCAC
ACAGTCCATCATCCAGTCCTGGATGAGCCAATAGCTGAAGCTGTCTGTATTATCGCAGACACGGATAAAT
GGAGTGTGCAGGTAGCTACAAGTCAGAGGAAAGTGACGGACAACATGAAACTAGGCCAGGATGTCCTGGT
CTCTAGTCAGGTGTCCAGTTTGCTTCAGTCCATTTTACAGCTCTATAAGCTTCACCTCCCTGCTGATTTT
TGCATCATGCATCTTGAAGATAGACTACAGGAGATGTACCTTAAAAGTAAAATGCTATCTGAATATCTCC
GGGGACACACACGAGTCCATGTGAAAGAATTAGGTGTCGTACTGGGGATTGAATCCAACGACCTGCCTCT
GTTGACTGCTATTGCCAGTACTCATTCTCCTTATGTGGCTCAAATACTCTTATAA

Translation (1114 aa):
MAPTLLQKLFNKRGSSGSSAAASAQGRAPKEGPAFSWSCSEFDLNEIRLIVYQDCDRRGRQVLFDSKAVQ
KIEEVTAQKTEDVPIKISAKCCQGSSSVSSSSSSSISSHSSSGGSSHHAKEQLPKYQYTRPASDVNMLGE
MMFGSVAMSYKGSTLKIHYIRSPPQLMISKVFSARMGSFCGSTNNLQDSFEYINQDPNLGKLNTNQNSLG
PCRTGSNLAHSTPVDMPSRGQNEDRDSGIARSASLSSLLITPFPSPSSSTSSSSSYQRRWLRSQTTSLEN
GIIPRRSTDETFSLAEETCSSNPAMVRRKKIAISIIFSLCEKEEAQRNFQDFFFSHFPLFESHMNRLKSA
IEKAMISCRKIAESSLRVQFYVSRLMEALGEFRGTIWNLYSVPRIAEPVWLTMMSGTLEKNQLCQRFLKE
FTLLIEQINKNQFFAALLTAVLTYHLAWVPTVMPVDHPPIKAFSEKRTSQSVNMLAKTHPYNPLWAQLGD
LYGAIGSPVRLTRTVVVGKQKDLVQRILYVLTYFLRCSELQENQLTWSGNHGEGDQVLNGSKIITALEKG
EVEESEYVVITVRNEPALVPPILPPTAAERHNPWPTGFPECPEGTDSRDLGLKPDKEANRRPEQGSEACS
AGCLGPASDASWKPQNAFCGDEKNKEAPQDGSSRLPSCEVLGAGMKMDQQAVCELLKVEMPTRLPDRSVA
WPCPDRHLREKPSLEKVTFQIGSFASPESDFESRMKKMEERVKACGPSLEASEAADVAQDPQVSRSPFKP
GFQENVCCPQNRLSEGDEGESDKGFAEDRGSRNDMAADIAGQLSHAADLGTASHGAGGTGGRRLEATRGL
YVKAAEGPVLEPVAPRCVQRGPGLVAGANIPCGDDNKKANFRTEGDIPRNESSDSALGDSDDEACASAML
DLGHGGDRTGGSLEVELPLPRSQSISTQNVRNFGRSLLAGYCPTYMPDLVLHGTGSDEKLKQCLVADLVH
TVHHPVLDEPIAEAVCIIADTDKWSVQVATSQRKVTDNMKLGQDVLVSSQVSSLLQSILQLYKLHLPADF
CIMHLEDRLQEMYLKSKMLSEYLRGHTRVHVKELGVVLGIESNDLPLLTAIASTHSPYVAQILL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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