NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS9261.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9261.1 Public Homo sapiens 12 DHX37 24 110 108 CCDS HistoryNCBI Gene:57647Re-query CCDS DB by CCDS ID:9261.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9261.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000308736.7 ENSP00000311135.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000308736.7Link to Ensembl Protein Viewer:ENSP00000311135.2Re-query CCDS DB by Nucleotide ID:ENST00000308736Re-query CCDS DB by Protein ID:ENSP00000311135
Original member Current member NCBI NM_032656.4 NP_116045.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032656.4Link to Protein Sequence:NP_116045.2Re-query CCDS DB by Nucleotide ID:NM_032656Re-query CCDS DB by Protein ID:NP_116045Link to BLAST:NP_116045.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116045.2 1157 Q8IY37 1157 100% 0 0

Chromosomal Locations for CCDS 9261.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 124947802 124947887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 124948084 124948181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 124949986 124950059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 124950149 124950243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 124950413 124950550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 124950690 124950804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 124952398 124952570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 124953880 124953996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 124954087 124954211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 124956691 124956879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 124957029 124957135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 124960312 124960423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 124964394 124964626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 124964930 124965006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 124965668 124965812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 124966793 124966878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 124967123 124967218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 124968534 124968648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 124968867 124968968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 124971302 124971415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 124972503 124972599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 124975419 124975511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 124977342 124977490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 124980490 124980838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 124982511 124982623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 124986096 124986265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 124988917 124989022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3474 nt):
ATGGGGAAGCTGCGCCGGCGCTACAACATCAAGGGGCGCCAGCAGGCGGGCCCCGGACCCTCGAAGGGCC
CCCCCGAGCCGCCCCCCGTGCAGCTGGAACTGGAGGACAAGGACACGTTGAAGGGAGTTGATGCAAGCAA
CGCGCTCGTTCTACCGGGGAAGAAGAAAAAGAAGACCAAAGCCCCTCCCCTGTCGAAGAAGGAGAAGAAG
CCTCTGACCAAGAAGGAGAAGAAAGTGCTGCAGAAAATCTTAGAACAGAAGGAGAAAAAGAGCCAGCGAG
CAGAGATGCTACAGAAGCTGAGTGAAGTCCAGGCTTCCGAAGCTGAGATGAGACTCTTTTATACCACTTC
CAAGCTAGGCACTGGGAACCGCATGTATCACACCAAAGAGAAGGCTGACGAGGTGGTAGCCCCGGGCCAG
GAGAAGATCAGTAGCCTCAGCGGTGCCCACCGGAAGCGTCGCCGCTGGCCCTCAGCTGAGGAGGAGGAGG
AGGAGGAGGAGGAGTCGGAATCGGAGCTGGAGGAGGAGTCGGAGCTGGACGAGGACCCAGCTGCTGAGCC
GGCTGAGGCTGGTGTGGGGACCACCGTGGCACCTCTGCCGCCAGCTCCAGCACCCAGCAGTCAGCCCGTG
CCGGCTGGGATGACTGTTCCTCCTCCTCCAGCTGCAGCCCCACCACTGCCCAGGGCCCTGGCTAAGCCCG
CCGTCTTCATCCCCGTGAACCGCTCCCCGGAAATGCAGGAGGAACGGCTGAAGCTCCCAATTCTCTCCGA
AGAACAAGTAATCATGGAGGCTGTGGCCGAGCACCCCATCGTCATCGTGTGTGGTGAGACCGGCAGCGGG
AAGACCACACAGGTGCCTCAGTTTCTCTATGAAGCAGGCTTCAGCAGTGAAGACAGCATCATCGGTGTCA
CGGAGCCCCGCCGAGTGGCCGCCGTGGCCATGTCCCAGCGAGTGGCCAAGGAGATGAATCTGTCCCAGCG
GGTCGTCTCCTACCAGATCCGGTATGAAGGAAACGTGACAGAGGAGACCAGAATCAAGTTCATGACGGAT
GGTGTGCTGCTTAAAGAAATCCAGAAGGACTTCCTGCTGCTGCGGTACAAGGTGGTGATCATCGACGAGG
CCCACGAGAGGAGCGTGTACACGGACATCCTCATCGGCCTCCTGTCCCGCATTGTGACTCTCCGGGCTAA
GAGGAACCTGCCACTCAAGCTGCTCATCATGTCGGCCACGCTGCGGGTGGAGGACTTCACCCAGAACCCA
CGGCTCTTCGCCAAGCCGCCGCCGGTCATCAAGGTGGAATCCAGGCAGTTCCCAGTGACTGTGCATTTCA
ACAAGCGGACACCGCTGGAAGACTACAGTGGCGAGTGCTTCCGGAAGGTCTGCAAGATCCACCGGATGCT
GCCCGCAGGTGGCATCCTGGTGTTCCTGACGGGGCAGGCTGAGGTGCATGCGCTGTGCCGCAGGCTCAGG
AAGGCTTTCCCACCCTCCAGAGCCCGGCCACAAGAAAAGGACGACGATCAGAAAGACTCGGTGGAGGAAA
TGCGGAAGTTTAAGAAGTCAAGGGCCAGGGCCAAGAAGGCGCGGGCTGAGGTGCTGCCCCAGATCAACTT
GGATCATTACTCGGTGTTACCGGCAGGCGAAGGCGATGAGGACAGGGAGGCAGAAGTGGATGAGGAAGAG
GGGGCCCTGGACTCCGACCTCGATCTGGACCTGGGGGATGGCGGGCAAGATGGAGGTGAGCAGCCGGATG
CCTCCCTCCCGCTCCACGTGCTCCCGCTGTACTCTCTGCTGGCCCCAGAGAAGCAAGCACAGGTCTTTAA
GCCTCCACCGGAGGGGACTCGGTTGTGTGTTGTGGCCACCAATGTGGCCGAGACGTCGCTTACCATCCCT
GGCATCAAGTACGTGGTGGACTGTGGGAAGGTCAAGAAACGCTACTACGACCGCGTCACTGGCGTATCCT
CCTTCCGTGTCACCTGGGTCTCCCAGGCATCAGCTGACCAGCGAGCGGGCAGAGCAGGACGGACGGAGCC
CGGCCACTGCTACAGGCTGTATTCATCTGCGGTTTTTGGTGACTTCGAGCAGTTTCCTCCTCCAGAAATC
ACCCGGAGGCCTGTTGAAGACTTAATCCTTCAAATGAAGGCGCTCAACGTTGAAAAGGTCATCAACTTCC
CCTTCCCGACGCCCCCCTCCGTGGAAGCCCTTCTTGCCGCCGAGGAGCTGTTGATCGCACTGGGTGCCCT
GCAACCGCCCCAGAAAGCAGAAAGGGTGAAGCAACTGCAGGAGAACCGGCTGAGCTGCCCCATCACTGCG
CTGGGCCGGACAATGGCCACATTCCCCGTGGCACCCCGCTACGCTAAGATGCTGGCACTGAGCCGACAAC
ACGGCTGCCTGCCCTATGCCATCACCATCGTGGCCAGCATGACGGTGCGGGAGCTGTTTGAGGAGCTGGA
CAGACCAGCGGCCAGTGACGAGGAGCTCACCAGGCTGAAGAGCAAGCGGGCCCGGGTGGCCCAGATGAAG
AGGACCTGGGCAGGGCAGGGGGCTTCTCTGAAGCTCGGCGACCTCATGGTGCTGCTGGGCGCCGTGGGAG
CCTGTGAGTATGCCAGCTGCACACCCCAGTTTTGCGAAGCCAACGGGCTGCGGTACAAAGCCATGATGGA
GATCCGGCGCCTGCGGGGCCAGCTGACCACCGCAGTCAATGCCGTGTGCCCCGAGGCTGAGCTCTTCGTG
GATCCCAAGATGCAGCCGCCCACCGAGAGCCAGGTGACCTACCTGCGACAGATCGTGACGGCAGGCCTGG
GGGACCACTTGGCCCGCAGGGTCCAGAGCGAGGAGATGCTGGAGGACAAGTGGAGGAACGCCTACAAGAC
CCCTCTCCTCGACGACCCTGTCTTCATCCACCCCAGCTCCGTCCTTTTCAAAGAGCTCCCCGAGTTTGTG
GTCTACCAGGAAATCGTGGAGACCACTAAGATGTACATGAAAGGCGTCTCTAGCGTGGAGGTCCAGTGGA
TCCCGGCCCTGCTGCCCTCTTACTGCCAGTTTGACAAGCCCCTGGAGGAACCAGCCCCTACATACTGCCC
CGAGCGGGGGCGGGTGCTGTGTCACCGGGCCAGCGTGTTCTATCGCGTGGGCTGGCCGCTCCCCGCCATC
GAGGTGGATTTTCCAGAGGGGATTGACCGCTACAAGCACTTTGCCCGGTTCCTGCTGGAAGGGCAGGTCT
TCCGCAAGCTGGCCTCATACCGGAGCTGTCTGCTGTCCAGCCCCGGCACCATGCTGAAGACGTGGGCCAG
GCTGCAGCCCCGTACGGAGAGCCTTCTGCGAGCCCTGGTTGCAGAGAAGGCTGACTGCCATGAAGCCTTG
CTGGCTGCTTGGAAGAAAAACCCCAAATACCTGCTGGCTGAGTACTGTGAGTGGCTTCCACAGGCCATGC
ACCCCGATATCGAGAAAGCCTGGCCCCCCACCACTGTCCACTGA

Translation (1157 aa):
MGKLRRRYNIKGRQQAGPGPSKGPPEPPPVQLELEDKDTLKGVDASNALVLPGKKKKKTKAPPLSKKEKK
PLTKKEKKVLQKILEQKEKKSQRAEMLQKLSEVQASEAEMRLFYTTSKLGTGNRMYHTKEKADEVVAPGQ
EKISSLSGAHRKRRRWPSAEEEEEEEEESESELEEESELDEDPAAEPAEAGVGTTVAPLPPAPAPSSQPV
PAGMTVPPPPAAAPPLPRALAKPAVFIPVNRSPEMQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSG
KTTQVPQFLYEAGFSSEDSIIGVTEPRRVAAVAMSQRVAKEMNLSQRVVSYQIRYEGNVTEETRIKFMTD
GVLLKEIQKDFLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVEDFTQNP
RLFAKPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEVHALCRRLR
KAFPPSRARPQEKDDDQKDSVEEMRKFKKSRARAKKARAEVLPQINLDHYSVLPAGEGDEDREAEVDEEE
GALDSDLDLDLGDGGQDGGEQPDASLPLHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIP
GIKYVVDCGKVKKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFPPPEI
TRRPVEDLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQLQENRLSCPITA
LGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELFEELDRPAASDEELTRLKSKRARVAQMK
RTWAGQGASLKLGDLMVLLGAVGACEYASCTPQFCEANGLRYKAMMEIRRLRGQLTTAVNAVCPEAELFV
DPKMQPPTESQVTYLRQIVTAGLGDHLARRVQSEEMLEDKWRNAYKTPLLDDPVFIHPSSVLFKELPEFV
VYQEIVETTKMYMKGVSSVEVQWIPALLPSYCQFDKPLEEPAPTYCPERGRVLCHRASVFYRVGWPLPAI
EVDFPEGIDRYKHFARFLLEGQVFRKLASYRSCLLSSPGTMLKTWARLQPRTESLLRALVAEKADCHEAL
LAAWKKNPKYLLAEYCEWLPQAMHPDIEKAWPPTTVH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH