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Report for CCDS25848.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
25848.1 Public Mus musculus 12 Rsad2 23 108 98 CCDS HistoryNCBI Gene:58185Re-query CCDS DB by CCDS ID:25848.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 25848.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000020970.9 ENSMUSP00000020970.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000020970.9Link to Ensembl Protein Viewer:ENSMUSP00000020970.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000020970Re-query CCDS DB by Protein ID:ENSMUSP00000020970
Original member Current member NCBI NM_021384.4 NP_067359.2 Accepted alive Link to Nucleotide Sequence:NM_021384.4Link to Protein Sequence:NP_067359.2Re-query CCDS DB by Nucleotide ID:NM_021384Re-query CCDS DB by Protein ID:NP_067359Link to BLAST:NP_067359.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067359.2 362 Q8CBB9 362 100% 0 0

Chromosomal Locations for CCDS 25848.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 26445406 26445570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 26447152 26447184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 26448583 26448732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 26450546 26450775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 26454018 26454179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 26456071 26456419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1089 nt):
ATGGGGATGCTGGTGCCCACTGCTCTAGCTGCTCGGCTGCTGAGCCTGTTCCAGCAGCAGCTGGGTTCCC
TCTGGAGTGGCCTGGCCATCCTGTTCTGCTGGCTGAGAATAGCATTAGGGTGGCTAGATCCCGGGAAGGA
ACAGCCACAGGTCCGGGGTGAGCCGGAGGACACCCAGGAGACCCAGGAAGATGGGAACAGCACTCAGCCC
ACAACCCCCGTGAGTGTCAACTACCACTTCACTCGTCAGTGCAACTACAAATGTGGCTTCTGCTTCCACA
CAGCCAAGACATCCTTCGTGCTGCCCCTGGAGGAGGCCAAGCGAGGACTGCTTCTGCTCAAACAGGCTGG
TTTGGAGAAGATCAACTTTTCTGGAGGAGAACCCTTCCTTCAGGACAGGGGTGAATACTTGGGCAAGCTT
GTGAGATTCTGCAAGGAGGAGCTAGCCCTGCCCTCTGTGAGCATAGTGAGCAATGGCAGCCTTATCCGGG
AGAGATGGTTCAAGGACTATGGGGAGTATTTGGACATTCTTGCTATCTCCTGCGACAGCTTCGATGAGCA
GGTTAATGCTCTGATTGGCCGTGGTCAAGGAAAAAAGAACCATGTGGAAAACCTTCAAAAGCTGAGGAGG
TGGTGCAGGGATTACAAGGTGGCTTTCAAGATCAACTCTGTCATTAATCGCTTCAACGTGGACGAAGACA
TGAATGAACACATCAAGGCCCTGAGCCCTGTGCGCTGGAAGGTTTTCCAGTGCCTCCTAATTGAGGGTGA
GAACTCAGGAGAAGATGCCCTGAGGGAAGCAGAAAGATTTCTTATAAGCAATGAAGAATTTGAAACATTC
TTGGAGCGTCACAAAGAGGTGTCCTGTTTGGTGCCTGAATCTAACCAGAAGATGAAAGACTCCTACCTTA
TCCTAGATGAATATATGCGCTTTCTGAACTGTACCGGTGGCCGGAAGGACCCTTCCAAGTCTATTCTGGA
TGTTGGCGTGGAAGAAGCAATAAAGTTCAGTGGATTTGATGAGAAGATGTTTCTGAAGCGTGGCGGAAAG
TATGTGTGGAGTAAAGCTGACCTGAAGCTGGACTGGTGA

Translation (362 aa):
MGMLVPTALAARLLSLFQQQLGSLWSGLAILFCWLRIALGWLDPGKEQPQVRGEPEDTQETQEDGNSTQP
TTPVSVNYHFTRQCNYKCGFCFHTAKTSFVLPLEEAKRGLLLLKQAGLEKINFSGGEPFLQDRGEYLGKL
VRFCKEELALPSVSIVSNGSLIRERWFKDYGEYLDILAISCDSFDEQVNALIGRGQGKKNHVENLQKLRR
WCRDYKVAFKINSVINRFNVDEDMNEHIKALSPVRWKVFQCLLIEGENSGEDALREAERFLISNEEFETF
LERHKEVSCLVPESNQKMKDSYLILDEYMRFLNCTGGRKDPSKSILDVGVEEAIKFSGFDEKMFLKRGGK
YVWSKADLKLDW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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