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Report for CCDS11785.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11785.1 Public Homo sapiens 17 MRPL12 24 110 108 CCDS HistoryNCBI Gene:6182Re-query CCDS DB by CCDS ID:11785.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11785.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000333676.8 ENSP00000333837.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000333676.8Link to Ensembl Protein Viewer:ENSP00000333837.3Re-query CCDS DB by Nucleotide ID:ENST00000333676Re-query CCDS DB by Protein ID:ENSP00000333837
Original member Current member NCBI NM_002949.4 NP_002940.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002949.4Link to Protein Sequence:NP_002940.2Re-query CCDS DB by Nucleotide ID:NM_002949Re-query CCDS DB by Protein ID:NP_002940Link to BLAST:NP_002940.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002940.2 198 P52815 198 100% 0 0

Chromosomal Locations for CCDS 11785.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 81703502 81703575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81704244 81704430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81704633 81704716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81706906 81707040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81707124 81707240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (597 nt):
ATGCTGCCGGCGGCCGCTCGCCCCCTGTGGGGGCCTTGCCTTGGGCTTCGGGCCGCTGCGTTCCGCCTTG
CCAGGCGACAGGTGCCATGTGTCTGTGCCGTGCGACATATGAGGAGCAGCGGCCATCAGAGGTGTGAGGC
CCTCGCTGGTGCACCCCTGGATAACGCCCCCAAGGAGTACCCCCCCAAGATACAGCAGCTGGTCCAGGAC
ATCGCCAGCCTCACTCTCTTGGAAATCTCAGACCTCAACGAGCTCCTGAAGAAAACGTTGAAGATCCAGG
ATGTCGGGCTTGTGCCGATGGGTGGTGTGATGTCTGGGGCTGTCCCTGCTGCAGCAGCCCAGGAGGCGGT
GGAAGAAGATATCCCCATAGCGAAAGAACGGACACATTTCACCGTCCGCCTGACCGAGGCGAAGCCCGTG
GACAAAGTGAAGCTGATCAAGGAAATCAAGAACTACATCCAAGGCATCAACCTCGTCCAGGCAAAGAAGC
TGGTGGAGTCCCTGCCCCAGGAAATCAAAGCCAATGTCGCCAAAGCTGAGGCGGAGAAGATCAAGGCGGC
CCTGGAGGCGGTGGGCGGCACCGTGGTTCTGGAGTAG

Translation (198 aa):
MLPAAARPLWGPCLGLRAAAFRLARRQVPCVCAVRHMRSSGHQRCEALAGAPLDNAPKEYPPKIQQLVQD
IASLTLLEISDLNELLKKTLKIQDVGLVPMGGVMSGAVPAAAAQEAVEEDIPIAKERTHFTVRLTEAKPV
DKVKLIKEIKNYIQGINLVQAKKLVESLPQEIKANVAKAEAEKIKAALEAVGGTVVLE


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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