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Report for CCDS51744.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51744.1 Public Mus musculus 6 Klf14 23 108 98 CCDS HistoryNCBI Gene:619665Re-query CCDS DB by CCDS ID:51744.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51744.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000101589.4 ENSMUSP00000099122.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000101589.4Link to Ensembl Protein Viewer:ENSMUSP00000099122.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000101589Re-query CCDS DB by Protein ID:ENSMUSP00000099122
Original member Current member NCBI NM_001135093.1 NP_001128565.1 Accepted alive Link to Nucleotide Sequence:NM_001135093.1Link to Protein Sequence:NP_001128565.1Re-query CCDS DB by Nucleotide ID:NM_001135093Re-query CCDS DB by Protein ID:NP_001128565Link to BLAST:NP_001128565.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001128565.1 325 Q19A41 325 100% 0 0

Chromosomal Locations for CCDS 51744.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 30957720 30958697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (978 nt):
ATGTCGGCCGCCGTGGCTTGCCTGGACTACTTCGCTGCCGAGTGCCTGGTGTCTATGTCCACCCGCGCCG
TGCTGCACCGGCGCGCAACGGACCCCGAAGGCGCGAGCGCAGCGGCTGTCTCCGAGGTGGGTGCAGTGTC
TCGGGAGTCGGCGGGGAAGGGTACCGGGTCACGGGGGGTGCTGTGGATACCCCCAGTCCTCCAGGTCCCC
ACCCCGAGCCCCGGAGAAGGCGATGGCGCGCCCCACCTGCTGGCTGCGAGCGCTTTGGCTGATTTAAGCT
GTGGTGCCCGGGAAGACTTCAGGGAAGACTCCGAAGAAGCTCCGTGTGCCTCAACTAGCTGCTTCGAGCC
GACCTGGTGCTCCAGCCCTACTGGGGGCTCTGAGCCTACCCAGGCCTTCTTCGAGGATGAGCTCTCTGAC
GCCGAGAGCTCCTGCAGTGATTCTGCTATCCTGGATGCGCCTGAGGCCTCAGAGGAGCCGGATGACAGCG
GAGAAGTGCCCGAGGGGCCCCCAGGGGCCCGCCCTGCGCCATCAACGGGCCCGACGTACCGAAGGAGGCA
GATTACGCCCGCATCCAAGCGACATCAGTGCTCCTTCCATGGCTGCAACAAGGCCTACTACAAGTCGTCG
CACCTCAAGTCACACCAGCGTACCCACACGGGGGAACGCCCCTTCTCCTGTGATTGGCTCGACTGCGACA
AGAAGTTTACGCGTTCTGATGAGCTAGCCCGCCACTACAGGACGCACACCGGTGAAAAGCGCTTCTCCTG
CCCGCTGTGTCCCAAGCAGTTCTCTCGGAGCGACCACCTGACCAAGCATGCTCGTCGCCATCCAACTTAC
CATCCCGACATGATCGAGTACCGAGGTCGTCGTCGCACTCCCCGCCCTGAGCCACCACCCCCAGCCATGG
TGGAAAGCTCTGGTTCCGACTCCAGCTCCTCTTCTGGCCAGGAGACCAGCTTCACTGCTTGCCTGTAG

Translation (325 aa):
MSAAVACLDYFAAECLVSMSTRAVLHRRATDPEGASAAAVSEVGAVSRESAGKGTGSRGVLWIPPVLQVP
TPSPGEGDGAPHLLAASALADLSCGAREDFREDSEEAPCASTSCFEPTWCSSPTGGSEPTQAFFEDELSD
AESSCSDSAILDAPEASEEPDDSGEVPEGPPGARPAPSTGPTYRRRQITPASKRHQCSFHGCNKAYYKSS
HLKSHQRTHTGERPFSCDWLDCDKKFTRSDELARHYRTHTGEKRFSCPLCPKQFSRSDHLTKHARRHPTY
HPDMIEYRGRRRTPRPEPPPPAMVESSGSDSSSSSGQETSFTACL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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