NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS32333.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32333.1 Public Homo sapiens 15 RCCD1 24 110 108 CCDS HistoryNCBI Gene:91433Re-query CCDS DB by CCDS ID:32333.1Re-query CCDS DB by GeneID:91433See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32333.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000394258.7 ENSP00000377801.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000394258.7Link to Ensembl Protein Viewer:ENSP00000377801.2Re-query CCDS DB by Nucleotide ID:ENST00000394258Re-query CCDS DB by Protein ID:ENSP00000377801
Original member Current member EBI ENST00000556618.1 ENSP00000451963.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000556618.1Link to Ensembl Protein Viewer:ENSP00000451963.1Re-query CCDS DB by Nucleotide ID:ENST00000556618Re-query CCDS DB by Protein ID:ENSP00000451963
Original member Current member NCBI NM_001017919.2 NP_001017919.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001017919.2Link to Protein Sequence:NP_001017919.1Re-query CCDS DB by Nucleotide ID:NM_001017919Re-query CCDS DB by Protein ID:NP_001017919Link to BLAST:NP_001017919.1
Original member Current member NCBI NM_033544.3 NP_291022.2 Accepted alive Link to Nucleotide Sequence:NM_033544.3Link to Protein Sequence:NP_291022.2Re-query CCDS DB by Nucleotide ID:NM_033544Re-query CCDS DB by Protein ID:NP_291022Link to BLAST:NP_291022.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001017919.1 376 A6NED2 376 100% 0 0
NP_291022.2 376 A6NED2 376 100% 0 0

Chromosomal Locations for CCDS 32333.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 90956735 90956900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90957113 90957503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90957604 90957725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90959900 90959998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90960328 90960498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90961025 90961054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90961618 90961769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1131 nt):
ATGGCGGAGGAGCGGCCGGGGGCCTGGTTCGGCTTCGGTTTCTGCGGCTTCGGGCAGGAGCTGGGCTCCG
GACGCGGGCGCCAGGTGCACAGCCCCAGTCCGCTGCGGGCGGGCGTCGACATCTGCCGCGTGAGCGCGAG
CTGGAGCTACACCGCTTTCGTGACCCGTGGAGGCCGCTTGGAGCTGTCGGGCTCAGCCAGCGGCGCGGCG
GGCCGCTGCAAGGACGCGTGGGCCTCGGAGGGGCTCCTCGCGGTGCTGCGCGCCGGGCCGGGGCCGGAGG
CGTTACTGCAGGTCTGGGCGGCCGAATCGGCGCTGCGTGGGGAGCCATTGTGGGCCCAGAATGTGGTGCC
CGAGGCCGAAGGGGAAGACGATCCGGCCGGTGAGGCCCAGGCTGGGAGGCTACCCCTGCTGCCCTGCGCC
CGTGCCTACGTGAGCCCGCGGGCGCCCTTCTACCGGCCTCTGGCTCCGGAGCTGCGGGCACGCCAGCTGG
AGCTGGGCGCCGAGCACGCGTTGCTGCTGGACGCTGCTGGCCAGGTGTTCTCCTGGGGCGGGGGCAGGCA
TGGACAGCTGGGCCATGGGACCCTGGAGGCAGAGCTGGAGCCACGGCTGTTGGAGGCGTTGCAGGGCCTA
GTCATGGCTGAGGTGGCCGCGGGGGGCTGGCATTCTGTGTGTGTGAGTGAGACTGGGGATATTTATATCT
GGGGCTGGAATGAATCAGGGCAGCTGGCCCTGCCCACCAGGAACCTGGCAGAGGATGGAGAGACTGTCGC
AAGGGAAGCCACAGAACTGAATGAAGATGGTTCTCAGGTGAAGAGAACGGGTGGGGCTGAGGATGGAGCC
CCTGCCCCCTTCATAGCTGTCCAGCCCTTCCCGGCATTACTGGATCTCCCCATGGGCTCAGATGCAGTCA
AGGCCAGCTGTGGATCCCGGCACACAGCTGTGGTGACACGAACAGGGGAGCTCTACACCTGGGGCTGGGG
TAAATATGGACAGCTGGGCCACGAGGACACCACCAGCTTGGATCGGCCTCGCCGTGTGGAATACTTTGTA
GATAAGCAACTCCAAGTAAAGGCTGTCACCTGTGGGCCGTGGAACACCTACGTGTATGCTGTGGAGAAAG
GGAAGAGCTGA

Translation (376 aa):
MAEERPGAWFGFGFCGFGQELGSGRGRQVHSPSPLRAGVDICRVSASWSYTAFVTRGGRLELSGSASGAA
GRCKDAWASEGLLAVLRAGPGPEALLQVWAAESALRGEPLWAQNVVPEAEGEDDPAGEAQAGRLPLLPCA
RAYVSPRAPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGL
VMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAEDGA
PAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFV
DKQLQVKAVTCGPWNTYVYAVEKGKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH