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Report for CCDS7605.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7605.1 Public Homo sapiens 10 FAM204A 24 110 108 CCDS HistoryNCBI Gene:63877Re-query CCDS DB by CCDS ID:7605.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7605.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369172.8 ENSP00000358170.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000369172.8Link to Ensembl Protein Viewer:ENSP00000358170.4Re-query CCDS DB by Nucleotide ID:ENST00000369172Re-query CCDS DB by Protein ID:ENSP00000358170
Original member Current member EBI ENST00000369183.9 ENSP00000358183.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000369183.9Link to Ensembl Protein Viewer:ENSP00000358183.4Re-query CCDS DB by Nucleotide ID:ENST00000369183Re-query CCDS DB by Protein ID:ENSP00000358183
Original member Current member NCBI NM_001134672.2 NP_001128144.1 Accepted alive Link to Nucleotide Sequence:NM_001134672.2Link to Protein Sequence:NP_001128144.1Re-query CCDS DB by Nucleotide ID:NM_001134672Re-query CCDS DB by Protein ID:NP_001128144Link to BLAST:NP_001128144.1
Original member Current member NCBI NM_022063.3 NP_071346.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022063.3Link to Protein Sequence:NP_071346.1Re-query CCDS DB by Nucleotide ID:NM_022063Re-query CCDS DB by Protein ID:NP_071346Link to BLAST:NP_071346.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001128144.1 233 Q9H8W3 233 100% 0 0
NP_071346.1 233 Q9H8W3 233 100% 0 0

Chromosomal Locations for CCDS 7605.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 118310857 118310908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 118311207 118311313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 118326154 118326243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 118335114 118335213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 118335396 118335426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 118335554 118335641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 118336182 118336415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (702 nt):
ATGTGGAGTGGGCTGCTACCTCCTGGCCTAAATGAAAGTGACGCTGAGTCAAACTCGGAAGATGAAGCTA
CGTTGGAGAACTCTGGACTTAACTTACAGGAAGATAAAGAGGATGAGAGCATCAGAAAAACAGAAATCAT
AGATTTCTCAACAGATGAACCAAAAACTGAAACAGAGTCAAATGTAAATGCCTATGAAGAGTGTCCTTCT
GGAATTCCCATAGATATGTGGAATAAATTTCAAGAATTGCATAAAAAACATTCTGAACAGAAAAGCACAA
CCTCAAGATTCAGAGGGAAAAGAAGAAAACGCTCCAGAAAAGATAAATTGAAGAATGAAAAAGAATTACA
TAGTGAACCGTCCTCAAATGAAACCCAGTGGAAAGAGCTTACTCAGTATTTTGGAGTCAATGATAGATTT
GACCCGCCTGTTAAAAGGAAAAAAGTTGAGAAGTCAGGCCTTGAAAAGAGGATAGACCAGGCTGTGGAGG
AGTGGAATATTGAGAAGGCTGAGGAACTCAGCAACCAGCTAGCTACTCGAGAGCTTGGTGTAAAAATTGC
CAAAGCAGTTGCCTGCCACAACTTTGTAAAAGCCAAAAAGGAGGTTGAAAATTCACAGGCTGCCCGAAAA
AAGAAGAAACTTGCATGGGGGTTTGAAGCAAAGAAGAGATGGGAAACCAAAAGCAACATGGGATACATGT
AA

Translation (233 aa):
MWSGLLPPGLNESDAESNSEDEATLENSGLNLQEDKEDESIRKTEIIDFSTDEPKTETESNVNAYEECPS
GIPIDMWNKFQELHKKHSEQKSTTSRFRGKRRKRSRKDKLKNEKELHSEPSSNETQWKELTQYFGVNDRF
DPPVKRKKVEKSGLEKRIDQAVEEWNIEKAEELSNQLATRELGVKIAKAVACHNFVKAKKEVENSQAARK
KKKLAWGFEAKKRWETKSNMGYM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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