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Report for CCDS13108.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
13108.1 |
Public |
Homo sapiens |
20 |
ANKEF1 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:63926](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:13108.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 20 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 13108.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000378380.4 |
ENSP00000367631.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000378380.4](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000367631.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000378380](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000367631](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000378392.6 |
ENSP00000367644.1 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000378392.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000367644.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000378392](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000367644](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_022096.6 |
NP_071379.3 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_022096.6](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_071379.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_022096](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_071379](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_071379.3](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_198798.3 |
NP_942093.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_198798.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_942093.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_198798](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_942093](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_942093.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 13108.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2331 nt): ATGGCTTTAGCAGATAAGAGACTTGAGAACTTACAGATCTACAAAGTTCTTCAATGTGTGCGGAACAAAG ACAAGAAGCAGATAGAGAAGCTGACCAAGCTTGGATACCCTGAACTAATCAATTATACAGAACCCATTAA TGGACTTAGTGCTTTGCACTTAGCCTCAGTTTCCAATGATATTGATATGGTCAGCTTTCTCCTTGACCTT GGTGCTCACCCTGATGTGCAAGACCGAATGGGCTGTACTCCCACAATGAGGGCTGCAGAACTGGGCCATG AATTGTCAATGGAAATATTAGCAAAGGCAAAGGCTGATATGACTATAGTTGATAATGAAGGAAAAGGTGT TTTGTTTTACTGCATTTTACCGACTAAGCGGCATTATCGCTGTGCTCTGATCGCCCTTGAACATGGTGCA GATGTCAACAATTCTACCTATGAAGGAAAGCCAATATTCCTTAGAGCTTGTGAAGATGCACATGATGTTA AAGATGTGTGCCTGACATTTTTGGAAAAAGGAGCCAATCCTAATGCAATCAACTCATCCACAGGCCGCAC AGCTTTAATGGAAGCGTCAAGAGAAGGGGTAGTGGAAATAGTTCGAGGCATATTGGAAAGAGGAGGTGAA GTGAATGCATTTGACAACGACAGGCATCACGCTGCTCATTTTGCTGCTAAAGGAGGCTTTTTCGATATAT TGAAGCTTCTTTTTGCCTACAATGGAGACGTGGGGCTGATTTCGATAAATGGGAACACACCACTTCATTA TGCTGCCATGGGTGGTTTTGCAGACTGCTGTAAATATATAGCTCAGCGAGGATGTGACCTGAAATGGAAG AATTTAGATCATAAAACGCCCAGGGCTGTGGCTAAGGAAGGCGGCTTCAAAGCAGCAAGCAAAGAAATAC GCCGAGCAGAGAGAATCGCTAATAAACTAGCCAGGCCAGGAGCCAAAAATCCAAATCCACTGTGGGCCCT TAGACTGCACGATTGGTCCGTAGAACGTGAGGCTTTCCTCCGGGAAGCCTTTGCGGTTTTAGACAGGGGT GATGGAAGCATCAGCAAGAACGACTTCGTGATGGTGTTGGAGGAAAGGCAGGATTATGCAAGCTCAGAAC AGCTGGCTGCCATCGCTCACCTTCATGAGAAAACCCGGGGAGGAGGGGTCAATATTAATGAATTCTTTAA AGGAACCAGATATTTAAACAAGTCTTTTGTCTTAGGATCGTATGGACCTAAGAAAAAGGAAAAAGGGATG GGCAAAAAAGGAAAGAAAGGGAAATTTGTCTTACCCCTTCCAATCTGTGTCATTCCTGAGTACGCGTTTC CACGCCGGCAGGATGGTGGGCCACCGTATTACATGATTGAGACCTACAAGAATGTCACTGATAGCAGCCG GTTTAATAGAGATCATCCCCCAGAACATCCCATTCAGGATGACTCTGTTTGGTACATTGATGATTCAGAG AAGGTATTTTCAAACATTAATATTATCACCAAAGCAGGGGATCTGGCTTCTCTGAAAAAGGCCTTTGAAT CAGGAATACCTGTGGATATGAAGGATAATTATTACAAAACTCCGCTAATGACGGCGTGTGCAAGTGGAAA CATAGATGTGGTCAAGTTTCTTCTTGAAAAAGGAGCTAACGTTAATGCAACAGATAACTTTCTGTGGACT CCACTTCATTTTGCATGCCATGCAGGCCAACAAGACATTGTTGAGCTTCTTGTTGAATCTGGAGCTTTAA TAGATGCAGCTTCAATCAACAACTCAACTCCTTTAAATAGAGCCATTGAAAGCTGCAGACTGGATACAGT AAAATACCTACTTGATATTGGTGCTAAATTCCAGCTGGAAAATAGAAAAGGGCATAGTGCCATGGACGTT GCAAAGGCATATGCTGATTATAGAATAATTGATCTGATTAAAGAAAAGCTAGATAACTTGCCGAAACCAG CAGAAAATCAAAAACTAAAAGGCAAGACACCTCCTATACTGAAGACTGAAGGCCCTGAAATTAAGAAAGA AGAGGAACTGCTGTCATCAATTTATGGTGTACCAACCACATCAGAGGGAAAGAAAGTACAGAAGGGTAAT GTGGTTCATCTGAATTCATTGATTACCAGTGGTTATACTAAGAAAGTGGATATCACATTTATTCCACGGA GGATTTGGAGTCCTGAAGCCACAACAGCAGAGCTGATCAGGAAGAGGGAACTACGGCGAGAGAGGTTTAC ACATGAGGTGGACTTCGACGATTTTATGATGCCTTTTCAGAAGAACATCACAGAGAAAGCTCGAGCACTG GAAGCTGCCTTGAAGACCTAA
Translation (776 aa): MALADKRLENLQIYKVLQCVRNKDKKQIEKLTKLGYPELINYTEPINGLSALHLASVSNDIDMVSFLLDL GAHPDVQDRMGCTPTMRAAELGHELSMEILAKAKADMTIVDNEGKGVLFYCILPTKRHYRCALIALEHGA DVNNSTYEGKPIFLRACEDAHDVKDVCLTFLEKGANPNAINSSTGRTALMEASREGVVEIVRGILERGGE VNAFDNDRHHAAHFAAKGGFFDILKLLFAYNGDVGLISINGNTPLHYAAMGGFADCCKYIAQRGCDLKWK NLDHKTPRAVAKEGGFKAASKEIRRAERIANKLARPGAKNPNPLWALRLHDWSVEREAFLREAFAVLDRG DGSISKNDFVMVLEERQDYASSEQLAAIAHLHEKTRGGGVNINEFFKGTRYLNKSFVLGSYGPKKKEKGM GKKGKKGKFVLPLPICVIPEYAFPRRQDGGPPYYMIETYKNVTDSSRFNRDHPPEHPIQDDSVWYIDDSE KVFSNINIITKAGDLASLKKAFESGIPVDMKDNYYKTPLMTACASGNIDVVKFLLEKGANVNATDNFLWT PLHFACHAGQQDIVELLVESGALIDAASINNSTPLNRAIESCRLDTVKYLLDIGAKFQLENRKGHSAMDV AKAYADYRIIDLIKEKLDNLPKPAENQKLKGKTPPILKTEGPEIKKEEELLSSIYGVPTTSEGKKVQKGN VVHLNSLITSGYTKKVDITFIPRRIWSPEATTAELIRKRELRRERFTHEVDFDDFMMPFQKNITEKARAL EAALKT
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