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Report for CCDS445.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
445.1 Public Homo sapiens 1 OXCT2 24 110 108 CCDS HistoryNCBI Gene:64064Re-query CCDS DB by CCDS ID:445.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 445.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000327582.5 ENSP00000361914.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000327582.5Link to Ensembl Protein Viewer:ENSP00000361914.1Re-query CCDS DB by Nucleotide ID:ENST00000327582Re-query CCDS DB by Protein ID:ENSP00000361914
Original member Current member NCBI NM_022120.2 NP_071403.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022120.2Link to Protein Sequence:NP_071403.1Re-query CCDS DB by Nucleotide ID:NM_022120Re-query CCDS DB by Protein ID:NP_071403Link to BLAST:NP_071403.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_071403.1 517 Q9BYC2 517 100% 0 0

Chromosomal Locations for CCDS 445.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 39769702 39771255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1554 nt):
ATGGCGGCGCTGCGGCTCCTGGCGTCAGTGCTCGGGCGCGGGGTCCCCGCCGGCGGCTCAGGGCTCGCGC
TG
TCCCAGGGCTGCGCCCGCTGCTTTGCCACCAGTCCCCGGCTCCGTGCCAAGTTCTACGCGGACCCGGT
G
GAGATGGTGAAGGACATCTCTGACGGGGCGACCGTCATGATCGGGGGCTTCGGGCTCTGCGGGATCCCC
GAG
AACCTGATCGCCGCGCTGCTCAGGACCCGCGTGAAAGACCTGCAGGTGGTCAGCAGCAACGTGGGCG
TG
GAGGACTTCGGCCTGGGCCTCCTGCTGGCCGCCAGGCAGGTCCGTCGCATCGTCTGTTCCTACGTGGG
C
GAGAACACCCTGTGCGAGAGCCAGTACCTGGCAGGAGAGCTGGAGCTGGAGCTCACGCCCCAGGGCACC
CTG
GCCGAGCGCATCCGCGCGGGGGGCGCCGGGGTGCCCGCCTTCTACACCCCCACGGGCTACGGGACCC
TG
GTCCAGGAAGGGGGCGCCCCCATCCGCTACACCCCGGACGGCCACCTGGCGCTCATGAGCCAGCCCCG
A
GAGGTGAGGGAGTTCAACGGCGACCACTTCCTTTTGGAGCGCGCCATCCGGGCAGACTTCGCCCTGGTG
AAA
GGGTGGAAGGCCGACCGGGCAGGAAACGTGGTCTTCAGGAGAAGCGCCCGCAATTTCAACGTGCCCA
TG
TGCAAAGCTGCAGACGTCACGGCGGTGGAGGTGGAAGAGATCGTGGAGGTGGGGGCTTTCCCCCCAGA
A
GACATCCACGTTCCTAACATTTATGTAGATCGCGTGATAAAGGGGCAGAAATACGAGAAACGAATTGAG
CGC
TTAACGATCCTGAAAGAGGAAGATGGAGACGCTGGAAAGGAAGAGGACGCCAGGACGCGCATCATCA
GA
CGCGCAGCTCTGGAATTTGAGGACGGCATGTACGCCAATCTGGGCATAGGCATCCCCCTGCTGGCCAG
C
AACTTCATCAGTCCCAGCATGACTGTCCATCTTCACAGTGAGAACGGGATCCTGGGCCTGGGCCCGTTT
CCC
ACGGAAGATGAGGTGGATGCCGACCTCATCAATGCAGGCAAGCAGACGGTCACGGTGCTTCCCGGGG
GC
TGCTTCTTCGCCAGCGACGACTCCTTCGCCATGATCCGAGGGGGACACATCCAACTAACCATGCTTGG
A
GCCATGCAGGTTTCCAAATACGGCGACCTGGCGAACTGGATGATCCCTGGCAAGAAGGTGAAAGGCATG
GGC
GGTGCCATGGACTTGGTGTCCAGTCAGAAGACCAGAGTGGTGGTCACCATGCAGCACTGCACAAAGG
AC
AACACCCCCAAGATCATGGAGAAATGCACCATGCCGCTGACCGGGAAGCGGTGCGTGGACCGCATCAT
C
ACCGAGAAGGCCGTGTTTGACGTGCACAGGAAGAAAGAGCTGACGCTGAGGGAGCTCTGGGAGGGCCTG
ACG
GTGGACGACATCAAAAAGAGCACGGGGTGTGCCTTTGCTGTGTCCCCGAACCTCAGGCCCATGCAGC
AG
GTGGCACCCTGA


Translation (517 aa):
MAALRLLASVLGRGVPAGGSGLALSQGCARCFATSPRLRAKFYADPVEMVKDISDGATVMIGGFGLCGIP
E
NLIAALLRTRVKDLQVVSSNVGVEDFGLGLLLAARQVRRIVCSYVGENTLCESQYLAGELELELTPQGT
L
AERIRAGGAGVPAFYTPTGYGTLVQEGGAPIRYTPDGHLALMSQPREVREFNGDHFLLERAIRADFALV
K
GWKADRAGNVVFRRSARNFNVPMCKAADVTAVEVEEIVEVGAFPPEDIHVPNIYVDRVIKGQKYEKRIE
R
LTILKEEDGDAGKEEDARTRIIRRAALEFEDGMYANLGIGIPLLASNFISPSMTVHLHSENGILGLGPF
P
TEDEVDADLINAGKQTVTVLPGGCFFASDDSFAMIRGGHIQLTMLGAMQVSKYGDLANWMIPGKKVKGM
G
GAMDLVSSQKTRVVVTMQHCTKDNTPKIMEKCTMPLTGKRCVDRIITEKAVFDVHRKKELTLRELWEGL
T
VDDIKKSTGCAFAVSPNLRPMQQVAP




Links Key
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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