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Report for CCDS40382.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40382.1 Public Mus musculus 8 Abhd8 23 108 98 CCDS HistoryNCBI Gene:64296Re-query CCDS DB by CCDS ID:40382.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40382.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000008094.9 ENSMUSP00000008094.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000008094.9Link to Ensembl Protein Viewer:ENSMUSP00000008094.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000008094Re-query CCDS DB by Protein ID:ENSMUSP00000008094
Original member Current member NCBI NM_022419.3 NP_071864.2 Accepted alive Link to Nucleotide Sequence:NM_022419.3Link to Protein Sequence:NP_071864.2Re-query CCDS DB by Nucleotide ID:NM_022419Re-query CCDS DB by Protein ID:NP_071864Link to BLAST:NP_071864.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_071864.2 439 Q8R0P8 439 100% 0 0

Chromosomal Locations for CCDS 40382.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 71457183 71457377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 71458038 71458254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 71458378 71458548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 71461246 71461972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 71463466 71463475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1320 nt):
ATGACCTCAGAACACACCATGCTGACTGGGGTGACAGATGGCTTTTTCTGCTGCCTGCTGGGGACTCCCC
CTAACGCCGTGCGGCCACTGGAGAGTGTCGAGTCCAGTGACGGCTACACATTCGTGGAGGTCAAGCCAGG
CCGGGTGCTGCGGGTAAAGCATGCGGGGCCCGCGCCCATCCCCACGCCGCCACCACCACCTCCTGAAGAT
GATCCAGGGGTCAAGACGGGCCTTGTGCGCTGCCAGCGCCGTATCACAGTGTACCGCAACGGGAGGCTGG
TGGTGGAGAACCTGGGCCGAGCGCCTCGTGCCGACCTGCAAGGCCGCAGTGGCTCCGGGGACCCGCCTGC
TGCACTCGAGGTTGAGCTGGCTGAGCCCGCAGGAGGAGACACCCGGGCCAACCCAGGCAGCGGGCGACGG
CGCCGCCCACGGCGTCCGAAGAGGACCATCCACATCGACTGTGAGCAGCGCATCACCAGCTGCAAGGGTG
CGCAGGCTGATGTGGTGCTGTTCTTCATTCACGGAGTCGGTGGCTCACTCGCCATCTGGAAGGAGCAGCT
AGACTTCTTTGTGCGACTCGGCTATGAGGTGGTGGCACCTGACCTGGCGGGCCATGGAGCCAGCTCTGCG
CCGCAGGTGGCAGCTGCCTACACCTTTTACGCATTGGCAGAGGATATGAGGGCCATCTTCACACGCTATG
CCAAGAAGCGCAATGTGCTCATCGGCCATTCTTACGGTGTCTCCTTCTGTACTTTCCTGGCCCACGAGTA
CCCAGATCTTGTACACAAAGTGATCATGATCAACGGTGGGGGCCCCACGGCACTGGAGCCCAGCCTATGC
TCCATCTTCAACATGCCCACATGTGTCCTGCACTGCCTGTCACCTTGCCTGGCCTGGAGTTTCCTCAAGG
CCGGCTTTGCCCGCCAAGGGGCCAAAGAAAAGCAGCTGCTGAAGGAGGGCAATGCGTTCAATGTGTCCTC
CTTCGTGCTGCGGGCCATGATGAGTGGCCAGTATTGGCCTGAAGGCGACGAGGTCTACCACGCGGAGCTG
ACGGTACCCGTGCTGCTAGTGCACGGCATGCACGACAAATTTGTGCCAGTGGAAGAGGACCAACGCATGG
CTGAGATCCTGCTGCTGGCCTTTCTCAAGCTCATCGAGGAAGGCAGCCACATGGTGATGCTGGAGTGTCC
TGAAACGGTCAACACGCTGTTACACGAGTTCCTGCTGTGGGAGCCAGAACCCGAGGCTGAGCCAAAGCTC
GAGCCAAAGCCCAAGCCACAGCTGCTGCAGCCAGAGCCGGCTCCAGGGGAGGAGAAGTGA

Translation (439 aa):
MTSEHTMLTGVTDGFFCCLLGTPPNAVRPLESVESSDGYTFVEVKPGRVLRVKHAGPAPIPTPPPPPPED
DPGVKTGLVRCQRRITVYRNGRLVVENLGRAPRADLQGRSGSGDPPAALEVELAEPAGGDTRANPGSGRR
RRPRRPKRTIHIDCEQRITSCKGAQADVVLFFIHGVGGSLAIWKEQLDFFVRLGYEVVAPDLAGHGASSA
PQVAAAYTFYALAEDMRAIFTRYAKKRNVLIGHSYGVSFCTFLAHEYPDLVHKVIMINGGGPTALEPSLC
SIFNMPTCVLHCLSPCLAWSFLKAGFARQGAKEKQLLKEGNAFNVSSFVLRAMMSGQYWPEGDEVYHAEL
TVPVLLVHGMHDKFVPVEEDQRMAEILLLAFLKLIEEGSHMVMLECPETVNTLLHEFLLWEPEPEAEPKL
EPKPKPQLLQPEPAPGEEK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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