NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS10339.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10339.1 Public Homo sapiens 15 KLHL25 24 110 108 CCDS HistoryNCBI Gene:64410Re-query CCDS DB by CCDS ID:10339.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10339.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000337975.6 ENSP00000336800.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000337975.6Link to Ensembl Protein Viewer:ENSP00000336800.5Re-query CCDS DB by Nucleotide ID:ENST00000337975Re-query CCDS DB by Protein ID:ENSP00000336800
Original member Current member NCBI NM_022480.4 NP_071925.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022480.4Link to Protein Sequence:NP_071925.2Re-query CCDS DB by Nucleotide ID:NM_022480Re-query CCDS DB by Protein ID:NP_071925Link to BLAST:NP_071925.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_071925.2 589 Q9H0H3 589 100% 0 0

Chromosomal Locations for CCDS 10339.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 85768041 85769810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1770 nt):
ATGTCGGTCAGTGTCCATGAGACCCGCAAGTCGCGGAGCAGCACGGGGTCCATGAACGTCACCCTCTTCC
ACAAGGCCTCCCACCCGGACTGTGTGCTGGCCCACCTCAACACGCTTCGCAAGCACTGCATGTTCACCGA
CGTCACACTCTGGGCGGGCGACCGTGCCTTCCCCTGTCACCGTGCCGTGCTGGCCGCCTCTAGCCGCTAT
TTTGAGGCCATGTTCAGCCATGGCCTTCGGGAGAGCCGGGATGACACTGTCAACTTCCAGGACAACCTGC
ACCCGGAGGTGCTGGAGCTGCTGCTGGACTTTGCCTACTCCTCACGCATCGCCATCAACGAGGAGAACGC
TGAGTCACTGCTGGAGGCAGGCGACATGCTGCAGTTCCACGATGTGCGGGATGCTGCCGCCGAGTTCCTG
GAGAAGAACCTTTTCCCCTCCAACTGCCTGGGCATGATGCTGCTCTCGGACGCCCACCAGTGCCGCCGGC
TGTATGAGTTCTCCTGGCGCATGTGCCTGGTGCACTTTGAGACGGTGAGGCAGAGCGAGGACTTCAACAG
CCTGTCCAAGGACACACTGCTGGACCTCATCTCGAGTGATGAGCTGGAGACCGAGGACGAGCGGGTGGTC
TTCGAGGCCATCCTCCAGTGGGTGAAGCACGACCTGGAGCCACGGAAGGTCCACTTGCCCGAGCTCCTCC
GCAGCGTGCGTCTGGCCTTGCTGCCGTCCGACTGCCTGCAGGAGGCCGTCTCCAGCGAGGCCCTCCTCAT
GGCAGACGAGCGCACCAAGCTTATCATGGATGAGGCCCTGCGCTGCAAGACCAGGATCCTGCAGAATGAT
GGCGTGGTCACCAGCCCCTGTGCCCGGCCACGCAAGGCGGGCCACACGCTACTCATCCTGGGGGGCCAGA
CCTTCATGTGTGACAAGATCTACCAGGTGGACCACAAGGCCAAGGAGATCATCCCCAAGGCCGACCTGCC
CAGCCCCCGGAAGGAGTTCAGCGCCTCAGCGATCGGCTGCAAGGTCTATGTGACGGGGGGCAGGGGCTCC
GAGAACGGGGTCTCCAAGGATGTCTGGGTGTACGACACCGTACATGAGGAATGGTCCAAGGCGGCGCCCA
TGCTGATTGCCCGCTTTGGCCATGGCTCAGCTGAGCTGGAGAACTGCCTCTATGTGGTGGGGGGACACAC
ATCCCTGGCAGGGGTCTTCCCGGCCTCGCCTTCTGTCTCCCTGAAACAAGTGGAGAAATACGACCCTGGG
GCCAACAAGTGGATGATGGTGGCCCCCTTGCGGGATGGCGTCAGCAATGCCGCAGTGGTGAGTGCCAAGC
TGAAGCTCTTTGTTTTCGGAGGAACCAGCATCCACCGGGACATGGTGTCCAAGGTCCAGTGCTATGACCC
CTCGGAGAACAGGTGGACGATCAAGGCCGAGTGCCCCCAGCCTTGGCGGTACACAGCCGCTGCCGTCCTG
GGCAGCCAGATCTTCATCATGGGAGGTGACACGGAATTCACAGCCGCCTCGGCCTACCGCTTTGACTGTG
AGACCAACCAGTGGACGCGGATTGGGGACATGACTGCCAAGCGCATGTCCTGCCATGCCCTGGCTTCCGG
CAACAAGCTCTATGTGGTCGGGGGCTACTTTGGGACCCAGAGGTGTAAGACTCTGGACTGCTATGACCCC
ACTTCAGATACATGGAACTGCATCACCACAGTGCCCTACTCACTTATCCCCACGGCCTTTGTCAGCACCT
GGAAGCACCTGCCCGCGTGA

Translation (589 aa):
MSVSVHETRKSRSSTGSMNVTLFHKASHPDCVLAHLNTLRKHCMFTDVTLWAGDRAFPCHRAVLAASSRY
FEAMFSHGLRESRDDTVNFQDNLHPEVLELLLDFAYSSRIAINEENAESLLEAGDMLQFHDVRDAAAEFL
EKNLFPSNCLGMMLLSDAHQCRRLYEFSWRMCLVHFETVRQSEDFNSLSKDTLLDLISSDELETEDERVV
FEAILQWVKHDLEPRKVHLPELLRSVRLALLPSDCLQEAVSSEALLMADERTKLIMDEALRCKTRILQND
GVVTSPCARPRKAGHTLLILGGQTFMCDKIYQVDHKAKEIIPKADLPSPRKEFSASAIGCKVYVTGGRGS
ENGVSKDVWVYDTVHEEWSKAAPMLIARFGHGSAELENCLYVVGGHTSLAGVFPASPSVSLKQVEKYDPG
ANKWMMVAPLRDGVSNAAVVSAKLKLFVFGGTSIHRDMVSKVQCYDPSENRWTIKAECPQPWRYTAAAVL
GSQIFIMGGDTEFTAASAYRFDCETNQWTRIGDMTAKRMSCHALASGNKLYVVGGYFGTQRCKTLDCYDP
TSDTWNCITTVPYSLIPTAFVSTWKHLPA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH