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Report for CCDS1991.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1991.1 Public Homo sapiens 2 RMND5A 24 110 108 CCDS HistoryNCBI Gene:64795Re-query CCDS DB by CCDS ID:1991.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1991.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000283632.5 ENSP00000283632.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000283632.5Link to Ensembl Protein Viewer:ENSP00000283632.4Re-query CCDS DB by Nucleotide ID:ENST00000283632Re-query CCDS DB by Protein ID:ENSP00000283632
Original member Current member NCBI NM_022780.4 NP_073617.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022780.4Link to Protein Sequence:NP_073617.1Re-query CCDS DB by Nucleotide ID:NM_022780Re-query CCDS DB by Protein ID:NP_073617Link to BLAST:NP_073617.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_073617.1 391 Q9H871-1 391 100% 0 0

Chromosomal Locations for CCDS 1991.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 86720668 86720809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 86740927 86741069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 86751896 86752030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 86753458 86753558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 86765027 86765193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 86765859 86766024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 86770023 86770125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 86771558 86771712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 86773348 86773411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1176 nt):
ATGGATCAGTGCGTGACGGTGGAGCGCGAGCTGGAGAAGGTGCTGCACAAGTTCTCAGGCTACGGGCAGC
TGTGCGAGCGCGGCCTGGAGGAGCTCATCGACTACACCGGCGGCCTCAAGCACGAGATCCTGCAGAGCCA
CGGCCAAGATGCTGAATTATCAGGGACACTTTCACTTGTTTTGACACAGTGCTGTAAAAGAATAAAGGAT
ACTGTTCAAAAATTGGCCTCCGACCACAAAGACATCCACAGCAGTGTTTCTCGGGTTGGAAAAGCCATTG
ATAAGAATTTTGATTCTGACATTAGCAGTGTGGGAATAGATGGCTGCTGGCAGGCAGACAGCCAAAGGCT
TCTCAATGAGGTGATGGTGGAGCACTTCTTTCGACAAGGAATGCTGGATGTGGCTGAGGAGCTCTGTCAG
GAATCTGGTCTTTCTGTAGACCCAAGTCAGAAGGAACCATTTGTGGAGTTAAATAGAATATTAGAGGCAT
TAAAGGTCAGAGTTCTGAGACCTGCTCTGGAGTGGGCAGTGTCAAACCGGGAAATGCTTATAGCTCAAAA
CAGCTCCTTGGAATTTAAGCTACACAGACTGTATTTTATTAGCTTGTTAATGGGTGGAACCACAAATCAG
CGAGAGGCATTACAATATGCTAAAAATTTTCAGCCATTTGCCCTAAATCATCAAAAAGACATTCAGGTTT
TGATGGGAAGCCTTGTGTACCTGAGACAAGGGATTGAGAACTCACCATATGTTCACCTACTTGATGCAAA
CCAGTGGGCTGATATCTGTGACATCTTTACACGGGATGCTTGTGCCCTCCTGGGGCTCTCCGTGGAGTCC
CCTCTCAGTGTCAGTTTCTCAGCAGGTTGTGTGGCGCTGCCAGCTTTAATTAACATCAAAGCCGTGATTG
AACAGAGGCAGTGTACTGGAGTTTGGAACCAGAAAGATGAATTACCTATTGAAGTGGACCTTGGTAAAAA
GTGCTGGTATCACTCTATATTTGCCTGCCCCATTCTTCGTCAGCAAACAACAGATAACAATCCACCCATG
AAATTGGTCTGTGGTCATATTATATCAAGAGATGCCCTGAATAAAATGTTTAATGGTAGCAAATTAAAAT
GTCCCTACTGTCCAATGGAACAAAGTCCAGGAGATGCCAAACAGATATTTTTCTGA

Translation (391 aa):
MDQCVTVERELEKVLHKFSGYGQLCERGLEELIDYTGGLKHEILQSHGQDAELSGTLSLVLTQCCKRIKD
TVQKLASDHKDIHSSVSRVGKAIDKNFDSDISSVGIDGCWQADSQRLLNEVMVEHFFRQGMLDVAEELCQ
ESGLSVDPSQKEPFVELNRILEALKVRVLRPALEWAVSNREMLIAQNSSLEFKLHRLYFISLLMGGTTNQ
REALQYAKNFQPFALNHQKDIQVLMGSLVYLRQGIENSPYVHLLDANQWADICDIFTRDACALLGLSVES
PLSVSFSAGCVALPALINIKAVIEQRQCTGVWNQKDELPIEVDLGKKCWYHSIFACPILRQQTTDNNPPM
KLVCGHIISRDALNKMFNGSKLKCPYCPMEQSPGDAKQIFF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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