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Report for CCDS6518.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6518.1 Public Homo sapiens 9 LRRC19 24 110 108 CCDS HistoryNCBI Gene:64922Re-query CCDS DB by CCDS ID:6518.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6518.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000380055.6 ENSP00000369395.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000380055.6Link to Ensembl Protein Viewer:ENSP00000369395.5Re-query CCDS DB by Nucleotide ID:ENST00000380055Re-query CCDS DB by Protein ID:ENSP00000369395
Original member Current member NCBI NM_022901.3 NP_075052.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022901.3Link to Protein Sequence:NP_075052.1Re-query CCDS DB by Nucleotide ID:NM_022901Re-query CCDS DB by Protein ID:NP_075052Link to BLAST:NP_075052.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_075052.1 370 Q9H756 370 100% 0 0

Chromosomal Locations for CCDS 6518.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 26995521 26995849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26996311 26996499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26997728 26998241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 26999614 26999694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1113 nt):
ATGAAAGTCACAGGCATCACAATCCTCTTTTGGCCCCTCTCCATGATATTATTATCAGACAAAATCCAGT
CTTCTAAAAGAGAAGTCCAATGTAATTTTACTGAAAAAAATTATACCTTGATTCCAGCAGATATCAAGAA
AGATGTTACTATACTTGATCTCAGTTATAACCAAATTACTCTTAATGGTACAGACACAAGAGTTCTACAG
ACATACTTTTTACTCACAGAGCTCTATTTGATTGAGAACAAGGTTACTATCTTACATAATAACGGTTTTG
GTAACCTCTCCAGTCTAGAAATTTTAAATATCTGTAGAAACTCCATCTATGTAATTCAACAGGGTGCATT
TTTAGGCTTAAATAAACTAAAACAGTTATATCTCTGCCAAAACAAAATAGAACAACTGAATGCTGATGTA
TTTGTGCCTCTAAGAAGCCTAAAACTTCTGAATCTGCAAGGCAATTTGATTAGCTATTTGGATGTACCAC
CACTATTTCATCTGGAATTAATAACTTTATATGGAAACCTATGGAACTGCTCTTGCAGTCTATTTAATTT
GCAGAACTGGTTGAACACATCAAATGTGACATTAGAAAATGAGAACATCACCATGTGTAGCTACCCCAAC
AGCCTGCAGAGCTACAATATCAAAACAGTACCTCATAAGGCTGAATGCCACTCAAAATTTCCTTCATCAG
TAACTGAAGATCTTTATATTCATTTTCAGCCCATCAGCAATTCAATATTTAATAGCTCTTCGAACAACTT
AACAAGAAATTCAGAACATGAACCTCTTGGAAAAAGTTGGGCTTTTCTTGTTGGTGTTGTTGTCACTGTA
CTGACGACTTCACTTCTCATTTTTATTGCTATCAAATGCCCAATATGGTACAATATTCTGCTTAGTTATA
ATCATCATCGCCTGGAAGAGCATGAAGCAGAAACCTATGAAGATGGTTTTACTGGAAATCCAAGCTCTCT
TTCACAGATACCAGAAACAAACTCTGAAGAAACTACAGTAATATTTGAACAATTACATTCATTTGTGGTA
GATGATGATGGATTTATTGAAGACAAATATATAGATATCCATGAATTATGTGAAGAAAATTAA

Translation (370 aa):
MKVTGITILFWPLSMILLSDKIQSSKREVQCNFTEKNYTLIPADIKKDVTILDLSYNQITLNGTDTRVLQ
TYFLLTELYLIENKVTILHNNGFGNLSSLEILNICRNSIYVIQQGAFLGLNKLKQLYLCQNKIEQLNADV
FVPLRSLKLLNLQGNLISYLDVPPLFHLELITLYGNLWNCSCSLFNLQNWLNTSNVTLENENITMCSYPN
SLQSYNIKTVPHKAECHSKFPSSVTEDLYIHFQPISNSIFNSSSNNLTRNSEHEPLGKSWAFLVGVVVTV
LTTSLLIFIAIKCPIWYNILLSYNHHRLEEHEAETYEDGFTGNPSSLSQIPETNSEETTVIFEQLHSFVV
DDDGFIEDKYIDIHELCEEN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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