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Report for CCDS12843.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12843.1 Public Homo sapiens 19 ZNF649 24 110 108 CCDS HistoryNCBI Gene:65251Re-query CCDS DB by CCDS ID:12843.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12843.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000354957.8 ENSP00000347043.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000354957.8Link to Ensembl Protein Viewer:ENSP00000347043.2Re-query CCDS DB by Nucleotide ID:ENST00000354957Re-query CCDS DB by Protein ID:ENSP00000347043
Original member Current member NCBI NM_023074.4 NP_075562.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_023074.4Link to Protein Sequence:NP_075562.2Re-query CCDS DB by Nucleotide ID:NM_023074Re-query CCDS DB by Protein ID:NP_075562Link to BLAST:NP_075562.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_075562.2 505 Q9BS31 505 100% 0 0

Chromosomal Locations for CCDS 12843.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 51890618 51891897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 51896472 51896567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 51896852 51896978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 51900093 51900107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1518 nt):
ATGACAAAGGCCCAGGAATCACTGACCCTGGAGGATGTGGCTGTGGACTTCACCTGGGAGGAGTGGCAGT
TCCTGAGCCCTGCTCAGAAGGACCTGTACCGGGATGTGATGTTGGAGAACTACAGCAACCTTGTGTCAGT
GGGGTATCAAGCCGGCAAACCTGATGCCCTCACCAAGTTGGAACAAGGAGAACCACTATGGACACTAGAA
GATGAAATCCACAGTCCAGCCCACCCAGAAATTGAGAAAGCTGATGATCATCTGCAGCAGCCCTTGCAAA
ACCAAAAAATACTGAAGAGGACGGGACAACGCTATGAACACGGAAGAACTTTGAAATCATATTTAGGTTT
AACCAACCAGAGCAGAAGATACAACAGAAAGGAGCCTGCTGAGTTTAATGGAGATGGAGCTTTTCTCCAT
GATAATCATGAACAAATGCCTACGGAAATTGAATTCCCTGAAAGTAGAAAACCCATCAGCACCAAGTCAC
AATTCCTTAAACATCAGCAAACACACAACATAGAGAAAGCCCATGAATGCACTGACTGTGGGAAAGCTTT
CCTCAAGAAGTCTCAGCTCACTGAGCATAAGAGAATTCATACAGGAAAGAAACCCCACGTGTGTAGCTTG
TGTGGGAAAGCCTTCTACAAGAAGTACAGGCTCACTGAACACGAGAGAGCTCACAGAGGAGAGAAACCCC
ACGGGTGTAGCTTGTGTGGGAAAGCCTTCTACAAGAGGTACAGGCTCACTGAACACGAGAGAGCTCACAA
AGGAGAGAAACCATACGGGTGCAGTGAATGTGGGAAAGCCTTCCCCAGGAAATCTGAGCTTACTGAACAT
CAAAGGATTCACACGGGAATTAAGCCCCATCAATGCAGCGAATGTGGGAGAGCTTTCTCCAGAAAATCAC
TACTCGTTGTACATCAGCGAACTCATACAGGAGAGAAGCCTCATACATGCAGTGAATGTGGAAAAGGCTT
CATTCAGAAGGGCAATCTCAACATACATCAACGAACTCACACTGGAGAGAAACCTTATGGATGCATTGAC
TGTGGCAAGGCCTTCAGCCAGAAGTCTTGCCTTGTAGCACATCAGAGATATCATACAGGAAAGACTCCCT
TTGTATGTCCTGAATGTGGGCAACCCTGTTCACAGAAGTCAGGACTCATTAGACATCAGAAAATTCACTC
AGGAGAGAAACCCTATAAATGCAGTGACTGTGGGAAAGCCTTCCTTACAAAGACAATGCTCATTGTACAT
CACAGAACTCACACGGGAGAGAGACCCTATGGCTGTGATGAGTGTGAGAAAGCTTACTTCTATATGTCTT
GCCTTGTTAAACATAAGAGAATACACTCAAGGGAGAAACGGGGGGATTCAGTGAAGGTGGAAAATCCTTC
CACAGCAAGTCACAGCTTAAGTCCTAGTGAACATGTGCAGGGGAAAAGCCCTGTTAATATGGTAACTGTG
GCAATGGTGGCAGGGCAGTGTGAGTTTGCCCACATCCTGCATTCATGA

Translation (505 aa):
MTKAQESLTLEDVAVDFTWEEWQFLSPAQKDLYRDVMLENYSNLVSVGYQAGKPDALTKLEQGEPLWTLE
DEIHSPAHPEIEKADDHLQQPLQNQKILKRTGQRYEHGRTLKSYLGLTNQSRRYNRKEPAEFNGDGAFLH
DNHEQMPTEIEFPESRKPISTKSQFLKHQQTHNIEKAHECTDCGKAFLKKSQLTEHKRIHTGKKPHVCSL
CGKAFYKKYRLTEHERAHRGEKPHGCSLCGKAFYKRYRLTEHERAHKGEKPYGCSECGKAFPRKSELTEH
QRIHTGIKPHQCSECGRAFSRKSLLVVHQRTHTGEKPHTCSECGKGFIQKGNLNIHQRTHTGEKPYGCID
CGKAFSQKSCLVAHQRYHTGKTPFVCPECGQPCSQKSGLIRHQKIHSGEKPYKCSDCGKAFLTKTMLIVH
HRTHTGERPYGCDECEKAYFYMSCLVKHKRIHSREKRGDSVKVENPSTASHSLSPSEHVQGKSPVNMVTV
AMVAGQCEFAHILHS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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