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Report for CCDS75211.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75211.1 Public Homo sapiens 4 PRIMPOL 24 110 108 CCDS HistoryNCBI Gene:201973Re-query CCDS DB by CCDS ID:75211.1Re-query CCDS DB by GeneID:201973See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75211.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000512834.5 ENSP00000425316.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000512834.5Link to Ensembl Protein Viewer:ENSP00000425316.1Re-query CCDS DB by Nucleotide ID:ENST00000512834Re-query CCDS DB by Protein ID:ENSP00000425316
Original member Current member NCBI NM_001300768.2 NP_001287697.1 Accepted alive Link to Nucleotide Sequence:NM_001300768.2Link to Protein Sequence:NP_001287697.1Re-query CCDS DB by Nucleotide ID:NM_001300768Re-query CCDS DB by Protein ID:NP_001287697Link to BLAST:NP_001287697.1
Original member Current member NCBI NM_001345896.2 NP_001332825.1 Accepted alive Link to Nucleotide Sequence:NM_001345896.2Link to Protein Sequence:NP_001332825.1Re-query CCDS DB by Nucleotide ID:NM_001345896Re-query CCDS DB by Protein ID:NP_001332825Link to BLAST:NP_001332825.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001287697.1 559 Q96LW4-2 559 100% 0 0
NP_001332825.1 559 Q96LW4-2 559 100% 0 0

Chromosomal Locations for CCDS 75211.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 184657141 184657320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 184659340 184659437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 184661774 184661903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 184665917 184666064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 184672173 184672460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 184678232 184678394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 184682248 184682336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 184685412 184685498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 184685576 184685684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 184691499 184691581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 184691666 184691712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 184694522 184694779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1680 nt):
ATGAATAGAAAATGGGAAGCAAAACTGAAGCAAATTGAAGAACGAGCATCTCATTATGAGAGGAAACCGT
TGTCCTCAGTGTATAGACCAAGATTGTCCAAGCCAGAAGAACCACCCTCCATCTGGAGACTATTTCATCG
ACAAGCTCAAGCTTTTAATTTTGTTAAAAGCTGTAAAGAAGACGTTCATGTATTTGCTTTGGAATGCAAA
GTAGGAGATGGACAACGTATTTACCTTGTGACAACCTATGCTGAATTTTGGTTTTACTATAAATCCAGAA
AAAATCTCTTACACTGCTATGAAGTTATTCCTGAAAATGCTGTGTGCAAGCTTTATTTTGATTTGGAATT
TAACAAACCTGCCAACCCAGGAGCTGATGGGAAAAAGATGGTTGCATTACTCATTGAGTATGTGTGTAAA
GCACTTCAAGAGTTATACGGTGTTAATTGCTCAGCTGAAGATGTTTTGAACTTGGATTCTAGCACTGATG
AAAAATTCAGCCGGCATTTAATATTTCAGCTCCATGATGTGGCATTTAAAGATAATATTCATGTTGGTAA
TTTTTTGAGAAAAATTTTGCAGCCTGCTCTTGACTTGCTTGGCAGTGAAGATGATGATAGCGCTCCAGAG
ACAACAGGCCATGGATTTCCCCATTTTTCAGAAGCACCTGCAAGACAAGGATTTTCTTTCAATAAAATGT
TCACAGAAAAGGCTACAGAGGAAAGCTGGACATCGAATTCAAAGAAACTGGAGAGGCTGGGGTCAGCTGA
GCAAAGCAGTCCTGACCTTTCATTTCTAGTTGTGAAGAATAACATGGGAGAGAAGCATCTTTTTGTAGAT
CTCGGAGTTTATACAAGAAATAGAAACTTTCGGCTATATAAATCATCAAAAATTGGAAAGCGTGTGGCTT
TGGAGGTTACTGAAGATAACAAATTTTTTCCTATACAGTCAAAAGATGTTTCTGACGAATATCAATATTT
TCTCTCTTCTTTGGTCAGCAATGTCAGGTTCTCAGATACTTTACGAATTCTTACATGTGAGCCATCTCAG
AATAAACAAAAAGGAGTTGGATATTTTAACAGTATCGGCACTTCAGAAACCATTGAAGGTTTTCAGTGTT
CTCCCTATCCTGAAGTTGATCATTTTGTTCTTTCTTTGGTGAATAAAGATGGCATTAAAGGAGGAATTCG
GCGTTGGAACTACTTTTTCCCAGAAGAATTACTGGTTTATGATATTTGTAAATATCGGTGGTGTGAAAAC
ATTGGAAGAGCCCATAAGAGTAATAATATAATGATTCTGGTTGATCTGAAAAATGAAGTTTGGTATCAAA
AATGTCATGACCCTGTATGTAAAGCAGAAAACTTCAAATCTGACTGTTTCCCATTACCTGCTGAAGTATG
TCTCCTGTTTCTTTTCAAAGAGGAAGAAGAGTTTACAACAGATGAAGCAGATGAAACTAGGAGCAATGAA
ACCCAGAATCCTCATAAACCATCACCTAGCAGGCTGTCAACAGGTGCATCTGCTGATGCTGTCTGGGATA
ATGGCATTGATGATGCTTATTTTTTAGAAGCTACTGAAGATGCTGAATTAGCTGAAGCTGCAGAGAACAG
TCTTCTCAGTTATAACAGTGAAGTGGATGAAATTCCTGATGAACTAATTATAGAAGTATTACAAGAGTAA

Translation (559 aa):
MNRKWEAKLKQIEERASHYERKPLSSVYRPRLSKPEEPPSIWRLFHRQAQAFNFVKSCKEDVHVFALECK
VGDGQRIYLVTTYAEFWFYYKSRKNLLHCYEVIPENAVCKLYFDLEFNKPANPGADGKKMVALLIEYVCK
ALQELYGVNCSAEDVLNLDSSTDEKFSRHLIFQLHDVAFKDNIHVGNFLRKILQPALDLLGSEDDDSAPE
TTGHGFPHFSEAPARQGFSFNKMFTEKATEESWTSNSKKLERLGSAEQSSPDLSFLVVKNNMGEKHLFVD
LGVYTRNRNFRLYKSSKIGKRVALEVTEDNKFFPIQSKDVSDEYQYFLSSLVSNVRFSDTLRILTCEPSQ
NKQKGVGYFNSIGTSETIEGFQCSPYPEVDHFVLSLVNKDGIKGGIRRWNYFFPEELLVYDICKYRWCEN
IGRAHKSNNIMILVDLKNEVWYQKCHDPVCKAENFKSDCFPLPAEVCLLFLFKEEEEFTTDEADETRSNE
TQNPHKPSPSRLSTGASADAVWDNGIDDAYFLEATEDAELAEAAENSLLSYNSEVDEIPDELIIEVLQE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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