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Report for CCDS72754.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
72754.1 Public Homo sapiens 1 RNF19B 24 110 108 CCDS HistoryNCBI Gene:127544Re-query CCDS DB by CCDS ID:72754.1Re-query CCDS DB by GeneID:127544See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 72754.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000235150.5 ENSP00000235150.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000235150.5Link to Ensembl Protein Viewer:ENSP00000235150.4Re-query CCDS DB by Nucleotide ID:ENST00000235150Re-query CCDS DB by Protein ID:ENSP00000235150
Original member Current member NCBI NM_001300826.2 NP_001287755.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001300826.2Link to Protein Sequence:NP_001287755.1Re-query CCDS DB by Nucleotide ID:NM_001300826Re-query CCDS DB by Protein ID:NP_001287755Link to BLAST:NP_001287755.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001287755.1 731 Q6ZMZ0-4 731 100% 0 0

Chromosomal Locations for CCDS 72754.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 32936806 32937259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32938397 32938528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32942252 32942459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32944019 32944159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32945514 32945628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32946402 32946564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32948222 32948363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32949569 32949774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32964051 32964685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2196 nt):
ATGGGCTCCGAGAAGGACTCCGAGTCGCCGCGCTCCACATCGCTACATGCGGCCGCACCCGACCCTAAGT
GCCGCAGCGGCGGCCGGCGCCGGCGCCTCACCTTGCACAGCGTCTTCTCTGCCTCGGCCCGCGGCCGCCG
CGCCCGGGCCAAGCCGCAGGCCGAGCCGCCGCCCCCGGCTGCGCAGCCGCCGCCCGCCCCGGCCCCTGCC
GCGGCCCAGGGCCCGCCGCCCGAGGCGCTGCCCGCCGAGCCGGCCGCCGAGGCCGAGGCGGAGGCCGCGG
CGGCGGCGGCGGAGCCTGGGTTCGACGATGAGGAGGCGGCGGAGGGCGGTGGCCCGGGCGCGGAGGAGGT
GGAGTGTCCGCTGTGCCTGGTGCGGCTGCCGCCTGAGCGGGCCCCGCGCCTCCTCAGCTGTCCGCACCGC
TCGTGCCGGGACTGCCTCCGCCACTACCTGCGCCTGGAGATAAGCGAGAGCAGGGTGCCCATCAGCTGCC
CCGAGTGCAGCGAGCGACTCAACCCGCACGACATCCGCTTGCTGCTCGCCGACCCGCCGCTTATGCACAA
GTACGAGGAGTTCATGCTGCGCCGCTACCTAGCCTCGGACCCCGACTGCCGCTGGTGCCCGGCCCCGGAC
TGCGGTTATGCTGTTATTGCCTATGGCTGTGCCAGCTGCCCGAAGCTAACTTGTGAGAGGGAAGGTTGCC
AGACTGAGTTCTGCTACCACTGCAAGCAGATATGGCATCCAAATCAGACATGCGATATGGCCCGTCAACA
GAGGGCCCAGACTTTACGAGTTCGGACCAAACACACTTCAGGTCTCAGTTATGGGCAAGAATCTGGACCA
GATGACATCAAGCCATGCCCACGATGCAGTGCATACATTATCAAGATGAATGATGGAAGCTGTAATCACA
TGACCTGTGCAGTGTGTGGCTGTGAATTCTGTTGGCTTTGTATGAAAGAGATCTCAGACTTGCATTACCT
CAGCCCCTCTGGCTGTACATTCTGGGGCAAGAAGCCATGGAGCCGTAAGAAGAAAATTCTTTGGCAGCTG
GGCACGTTGATTGGTGCTCCAGTGGGGATTTCTCTCATTGCTGGCATTGCCATTCCTGCCATGGTCATTG
GCATTCCTGTTTATGTTGGAAGGAAGATTCACAGCAGGTATGAGGGAAGGAAAACCTCCAAACACAAGAG
GAATTTGGCTATCACTGGAGGAGTGACTTTGTCGGTCATTGCATCCCCAGTTATTGCTGCAGTTAGTGTT
GGTATTGGTGTCCCCATTATGCTGGCATATGTTTATGGGGTTGTGCCCATTTCTCTTTGTCGTGGAGGCG
GCTGTGGAGTTAGCACAGCCAACGGAAAAGGAGTGAAAATTGAATTTGATGAAGATGATGGTCCAATCAC
AGTGGCAGATGCCTGGAGAGCCCTCAAGAATCCCAGCATTGGGGAAAGCAGCATTGAAGGCCTGACTAGT
GTATTGAGCACTAGTGGAAGCCCTACAGATGGACTTAGTGTTATGCAAGGTCCTTACAGCGAAACGGCCA
GCTTTGCAGCCCTCTCAGGGGGCACGCTGAGTGGCGGCATTCTCTCCAGTGGCAAGGGAAAATATAGCAG
GTTAGAAGTTCAAGCCGATGTCCAAAAGGAAATTTTCCCCAAAGACACAGCCAGTCTTGGTGCAATTAGT
GACAACGCAAGCACTCGTGCTATGGCCGGTTCCATAATCAGTTCCTACAACCCACAGGACAGAGAATGCA
ACAATATGGAAATCCAAGTGGACATTGAAGCCAAACCAAGCCACTATCAGCTGGTGAGTGGAAGCAGCAC
GGAGGACTCGCTCCATGTTCATGCTCAGATGGCAGAGAATGAAGAAGAAGGTAGTGGTGGCGGAGGCAGT
GAAGAGGATCCCCCCTGCAGACACCAAAGCTGTGAACAGAAAGACTGCCTGGCCAGCAAACCTTGGGACA
TCAGCCTGGCCCAGCCTGAAAGCATCCGCAGTGACCTAGAGAGTTCTGATGCACAGTCAGACGATGTGCC
AGACATCACCTCAGATGAGTGTGGCTCCCCCCGCTCCCATACTGCAGCCTGCCCCTCGACCCCCAGAGCC
CAAGGTGCACCGAGCCCAAGTGCCCATATGAACCTCTCTGCCCTAGCCGAGGGACAAACTGTCTTGAAGC
CAGAAGGTGGAGAAGCCAGAGTATGA

Translation (731 aa):
MGSEKDSESPRSTSLHAAAPDPKCRSGGRRRRLTLHSVFSASARGRRARAKPQAEPPPPAAQPPPAPAPA
AAQGPPPEALPAEPAAEAEAEAAAAAAEPGFDDEEAAEGGGPGAEEVECPLCLVRLPPERAPRLLSCPHR
SCRDCLRHYLRLEISESRVPISCPECSERLNPHDIRLLLADPPLMHKYEEFMLRRYLASDPDCRWCPAPD
CGYAVIAYGCASCPKLTCEREGCQTEFCYHCKQIWHPNQTCDMARQQRAQTLRVRTKHTSGLSYGQESGP
DDIKPCPRCSAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEISDLHYLSPSGCTFWGKKPWSRKKKILWQL
GTLIGAPVGISLIAGIAIPAMVIGIPVYVGRKIHSRYEGRKTSKHKRNLAITGGVTLSVIASPVIAAVSV
GIGVPIMLAYVYGVVPISLCRGGGCGVSTANGKGVKIEFDEDDGPITVADAWRALKNPSIGESSIEGLTS
VLSTSGSPTDGLSVMQGPYSETASFAALSGGTLSGGILSSGKGKYSRLEVQADVQKEIFPKDTASLGAIS
DNASTRAMAGSIISSYNPQDRECNNMEIQVDIEAKPSHYQLVSGSSTEDSLHVHAQMAENEEEGSGGGGS
EEDPPCRHQSCEQKDCLASKPWDISLAQPESIRSDLESSDAQSDDVPDITSDECGSPRSHTAACPSTPRA
QGAPSPSAHMNLSALAEGQTVLKPEGGEARV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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