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Report for CCDS75307.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75307.1 Public Homo sapiens 5 C5orf24 24 110 108 CCDS HistoryNCBI Gene:134553Re-query CCDS DB by CCDS ID:75307.1Re-query CCDS DB by GeneID:134553See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75307.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000504727.1 ENSP00000421647.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000504727.1Link to Ensembl Protein Viewer:ENSP00000421647.1Re-query CCDS DB by Nucleotide ID:ENST00000504727Re-query CCDS DB by Protein ID:ENSP00000421647
Original member Current member NCBI NM_001300894.2 NP_001287823.1 Accepted alive Link to Nucleotide Sequence:NM_001300894.2Link to Protein Sequence:NP_001287823.1Re-query CCDS DB by Nucleotide ID:NM_001300894Re-query CCDS DB by Protein ID:NP_001287823Link to BLAST:NP_001287823.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001287823.1 155 Q7Z6I8-2 155 100% 0 0

Chromosomal Locations for CCDS 75307.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 134854901 134855327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 134857357 134857397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (468 nt):
ATGATGCATCCTGTTGCCAGCAGTAATCCAGCTTTCTGTGGGCCTGGCAAGCCTTCCTGCCTCAATGAAG
ATGCCATGAGAGCTGCTGATCAGTTTGACATATATTCCTCCCAGCAAAGCAAATACAGCCACACAGTCAA
CCACAAACCAATGGTTTGTCAGAGGCAAGACCCATTAAATGAAACACACTTGCAGACTACAAGTGGCAGA
AGCATAGAAATAAAAGATGAACTAAAGAAAAAGAAGAATCTCAACCGATCTGGTAAGCGTGGCCGGCCTT
CGGGAACCACCAAATCAGCAGGATACCGGACCAGCACAGGCAGACCCCTGGGAACCACCAAAGCAGCTGG
ATTTAAGACAAGTCCAGGCAGACCTTTGGGGACAACTAAAGCTGCGGGATACAAAGTCAGCCCAGGCAGA
CCTCCAGGAAAAAAGCAGCAAGCCTTCAGGTGTTCCAGTGATGCCTGA

Translation (155 aa):
MMHPVASSNPAFCGPGKPSCLNEDAMRAADQFDIYSSQQSKYSHTVNHKPMVCQRQDPLNETHLQTTSGR
SIEIKDELKKKKNLNRSGKRGRPSGTTKSAGYRTSTGRPLGTTKAAGFKTSPGRPLGTTKAAGYKVSPGR
PPGKKQQAFRCSSDA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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