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Report for CCDS57012.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57012.1 Public Mus musculus 15 Fignl2 23 108 98 CCDS HistoryNCBI Gene:668225Re-query CCDS DB by CCDS ID:57012.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57012.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000178140.1 ENSMUSP00000137256.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000178140.1Link to Ensembl Protein Viewer:ENSMUSP00000137256.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000178140Re-query CCDS DB by Protein ID:ENSMUSP00000137256
Original member Current member EBI ENSMUST00000213610.1 ENSMUSP00000150618.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000213610.1Link to Ensembl Protein Viewer:ENSMUSP00000150618.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000213610Re-query CCDS DB by Protein ID:ENSMUSP00000150618
Original member NCBI NM_001214911.2 NP_001201840.1 Updated not alive Link to Nucleotide Sequence:NM_001214911.2Link to Protein Sequence:NP_001201840.1Re-query CCDS DB by Nucleotide ID:NM_001214911Re-query CCDS DB by Protein ID:NP_001201840
Current member NCBI NM_001214911.3 NP_001201840.1 Accepted alive Link to Nucleotide Sequence:NM_001214911.3Link to Protein Sequence:NP_001201840.1Re-query CCDS DB by Nucleotide ID:NM_001214911Re-query CCDS DB by Protein ID:NP_001201840Link to BLAST:NP_001201840.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001201840.1 644 J3QK54 644 100% 0 0

Chromosomal Locations for CCDS 57012.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 101052465 101054399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1935 nt):
ATGCACTGGACACCGGAACACGCCCAGCCCCTAAACCAGTGGCCAGAGCAGCACCTGGACGTCTCCTCCA
CCACTCCGTCGCCGGCTCACAAGTTGGAGTTGCCTCCAGGGGGTCGCCAGCGCTGCCACTACGCTTGGGC
ACACGACGACATTTCCGCCCTCACAGCCTCCAACCTCCTCAAGCGCTACGCCGAGAAGTACTCCGGAGTC
CTGGACTACGAGCGCCCGGGCCTGGGCAGCTACGGTGACGCCGCCTTCCTCAACGGTGCCAAAGGGGACC
CGGAGCCCTGGCCCGGGCCAGAGCCACCTTACCCTCTAGCCTCGCTCCACGAAGGCCTCCCGGGAGCCAA
GGCGGCTGGCGCGGGTGGCTCCGCCGGCCTCGGGGGCTCCCCGGTAGTAGCTGGCAACCTGACTGAGCCG
CTGTACACGGGCAACGCGTGCGGGGGACCGTCGGCGGCCACTGAGTACGCGGCGGGCTACGGAGGCGGGT
ACCTGGCGTCCGGCTACTGCGCGCAAACGAGCGCCGCGCTCGCCCCGCCGCCCCCGCCCGCGCTGCTGCA
GCCAGCGCCGCCGCCCGGCTACGGCCCCTCGGCGCCGCTCTACAACTACCCGGCGGCCGGCTACGCGGCG
CAGCCCGGCTACGGGGCGCTCCCGCCGCCCGCCGCGCCGCCCGCGCCCTACTTGCCCTCCGGGCTGGCGG
CGCCCACGCCCCTGCCCGCGCCCGCGCCACCCCGGCCCGCGCCCTACGGCTTCCCCGCGGCCGCCGAGGG
CGTGTCGCTGAAGCGCAAGGCGGTGGACGAGGGCGCGGAAGCCCGCTACCGCAAGTACGCTTACGAGCCG
GCCAAGGCCCCCGCGGCCGACGGCGCCTCCTACCCCGCCGCGGACGACACCGAGTGTCGGGGCAACGGGT
TCCGTTCGAAGCCACCCGGGGCGACGGAGGATGGGACCGGCAAGTACGGCGGCGGCGGCCCTCTCAAGGT
CCTGGGCTCCCCCGCCTACGCGCCGCAGCTCGAGCCCTTTGACAAGTTCCCGGAGCGGGTCCCGGCCGCC
CACGGAGGCTTCGCGGAGCCGTCGGGGGAGCCCGCCAAGGGCGTGGACCCGGGGGCGCTGGAGCTGGTGA
GCAGCAAGATGGTAGACTGCGGGCCCCCAGTGCAGTGGGCGGATGTGGCGGGCCAGGGCGCGCTCAAGGC
GGCCCTAGAGGAGGAGCTGCTTTGGCCCTTGCTGAGGCCGCCCGCCTGTCCCGGCAGCGCGCTCCCGCCG
CGGACCGTGCTGTTCTTCGGGCCCCGCGGCTGCGGTAAGGCGCTGCTGGGGCGCTGCCTCGCCACCCGAC
TAGGTGCCACGCTGCTGCGCCTGCGCGGAGCCGGCCTGGCGGCCTCGGGCGCCGTCGAGGGCGCGCGCCT
CCTGCAGGCGGCCTTTGCTGCTGCGCGCTGCCGCCCGCCCGCTGTGCTGCTCATCAGCGAGCTGGACGCG
CTGCTGCCGGCGAGGGACGACGGCGCGTCCCTGCGGGCGCCTCTACTGACCTGCCTGGACGGCAGCTGCG
GCGCGCGCGCCGACGGCGTGCTGGTGGTGGGTACCACCTCGCGGCCGGCGGCCCTGGACGAAGCTACCCG
CCGGCGGTTCGCGCTGCGCTTCTACGTGGCGCTGCCCGACGGCGCGGCGCGCGGGCAGATCCTGCAGAGG
GCGCTGGCTCAGCAGGGCTGTGCGCTGAACGAGCGGGAGCTGGCCGCCCTGGTGCAGGGAACTCAGGGCT
TTTCTGGGGGCGAGCTGGGGCAGTTGTGCCAGCAGGCAGCGGCCGAGGCGGGCATCTCTGGACTGCAGAG
GCCCCTCTCCTACAAAGATGTGGAGGCTGCTCTAGCCAAGGTGGGCTCTCGGGCTCCCTCCAAGGAGCTG
GACTCGTTAGTTGAGTGGGACAAAATGTATGGCTCCGGACACTGA

Translation (644 aa):
MHWTPEHAQPLNQWPEQHLDVSSTTPSPAHKLELPPGGRQRCHYAWAHDDISALTASNLLKRYAEKYSGV
LDYERPGLGSYGDAAFLNGAKGDPEPWPGPEPPYPLASLHEGLPGAKAAGAGGSAGLGGSPVVAGNLTEP
LYTGNACGGPSAATEYAAGYGGGYLASGYCAQTSAALAPPPPPALLQPAPPPGYGPSAPLYNYPAAGYAA
QPGYGALPPPAAPPAPYLPSGLAAPTPLPAPAPPRPAPYGFPAAAEGVSLKRKAVDEGAEARYRKYAYEP
AKAPAADGASYPAADDTECRGNGFRSKPPGATEDGTGKYGGGGPLKVLGSPAYAPQLEPFDKFPERVPAA
HGGFAEPSGEPAKGVDPGALELVSSKMVDCGPPVQWADVAGQGALKAALEEELLWPLLRPPACPGSALPP
RTVLFFGPRGCGKALLGRCLATRLGATLLRLRGAGLAASGAVEGARLLQAAFAAARCRPPAVLLISELDA
LLPARDDGASLRAPLLTCLDGSCGARADGVLVVGTTSRPAALDEATRRRFALRFYVALPDGAARGQILQR
ALAQQGCALNERELAALVQGTQGFSGGELGQLCQQAAAEAGISGLQRPLSYKDVEAALAKVGSRAPSKEL
DSLVEWDKMYGSGH


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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