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Report for CCDS10429.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10429.1 Public Homo sapiens 16 SSTR5 24 110 108 CCDS HistoryNCBI Gene:6755Re-query CCDS DB by CCDS ID:10429.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10429.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000293897.6 ENSP00000293897.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000293897.6Link to Ensembl Protein Viewer:ENSP00000293897.4Re-query CCDS DB by Nucleotide ID:ENST00000293897Re-query CCDS DB by Protein ID:ENSP00000293897
Original member Current member EBI ENST00000689027.1 ENSP00000508487.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000689027.1Link to Ensembl Protein Viewer:ENSP00000508487.1Re-query CCDS DB by Nucleotide ID:ENST00000689027Re-query CCDS DB by Protein ID:ENSP00000508487
Original member Current member NCBI NM_001053.4 NP_001044.1 Accepted alive Link to Nucleotide Sequence:NM_001053.4Link to Protein Sequence:NP_001044.1Re-query CCDS DB by Nucleotide ID:NM_001053Re-query CCDS DB by Protein ID:NP_001044Link to BLAST:NP_001044.1
Original member Current member NCBI NM_001172560.3 NP_001166031.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001172560.3Link to Protein Sequence:NP_001166031.1Re-query CCDS DB by Nucleotide ID:NM_001172560Re-query CCDS DB by Protein ID:NP_001166031Link to BLAST:NP_001166031.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001044.1 364 P35346 364 100% 0 0
NP_001166031.1 364 P35346 364 100% 0 0

Chromosomal Locations for CCDS 10429.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 1078869 1079963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1095 nt):
ATGGAGCCCCTGTTCCCAGCCTCCACGCCCAGCTGGAACGCCTCCTCCCCGGGGGCTGCCTCTGGAGGCG
GTGACAACAGGACGCTGGTGGGGCCGGCGCCCTCGGCAGGGGCCCGGGCGGTGCTGGTGCCCGTGCTGTA
CCTGCTGGTGTGTGCGGCCGGGCTGGGCGGGAACACGCTGGTCATCTACGTGGTGCTGCGCTTCGCCAAG
ATGAAGACCGTCACCAACATCTACATTCTCAACCTGGCAGTGGCCGACGTCCTGTACATGCTGGGGCTGC
CTTTCCTGGCCACGCAGAACGCCGCGTCCTTCTGGCCCTTCGGCCCCGTCCTGTGCCGCCTGGTCATGAC
GCTGGACGGCGTCAACCAGTTCACCAGTGTCTTCTGCCTGACAGTCATGAGCGTGGACCGCTACCTGGCA
GTGGTGCACCCGCTGAGCTCGGCCCGCTGGCGCCGCCCGCGTGTGGCCAAGCTGGCGAGCGCCGCGGCCT
GGGTCCTGTCTCTGTGCATGTCGCTGCCGCTCCTGGTGTTCGCGGACGTGCAGGAGGGCGGTACCTGCAA
CGCCAGCTGGCCGGAGCCCGTGGGGCTGTGGGGCGCCGTCTTCATCATCTACACGGCCGTGCTGGGCTTC
TTCGCGCCGCTGCTGGTCATCTGCCTGTGCTACCTGCTCATCGTGGTGAAGGTGAGGGCGGCGGGCGTGC
GCGTGGGCTGCGTGCGGCGGCGCTCGGAGCGGAAGGTGACGCGCATGGTGTTGGTGGTGGTGCTGGTGTT
TGCGGGATGTTGGCTGCCCTTCTTCACCGTCAACATCGTCAACCTGGCCGTGGCGCTGCCCCAGGAGCCC
GCCTCCGCCGGCCTCTACTTCTTCGTGGTCATCCTCTCCTACGCCAACAGCTGTGCCAACCCCGTCCTCT
ACGGCTTCCTCTCTGACAACTTCCGCCAGAGCTTCCAGAAGGTTCTGTGCCTCCGCAAGGGCTCTGGTGC
CAAGGACGCTGACGCCACGGAGCCGCGTCCAGACAGGATCCGGCAGCAGCAGGAGGCCACGCCACCCGCG
CACCGCGCCGCAGCCAACGGGCTTATGCAGACCAGCAAGCTGTGA

Translation (364 aa):
MEPLFPASTPSWNASSPGAASGGGDNRTLVGPAPSAGARAVLVPVLYLLVCAAGLGGNTLVIYVVLRFAK
MKTVTNIYILNLAVADVLYMLGLPFLATQNAASFWPFGPVLCRLVMTLDGVNQFTSVFCLTVMSVDRYLA
VVHPLSSARWRRPRVAKLASAAAWVLSLCMSLPLLVFADVQEGGTCNASWPEPVGLWGAVFIIYTAVLGF
FAPLLVICLCYLLIVVKVRAAGVRVGCVRRRSERKVTRMVLVVVLVFAGCWLPFFTVNIVNLAVALPQEP
ASAGLYFFVVILSYANSCANPVLYGFLSDNFRQSFQKVLCLRKGSGAKDADATEPRPDRIRQQQEATPPA
HRAAANGLMQTSKL


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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