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Report for CCDS15967.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15967.1 Public Mus musculus 2 Ndufa8 23 108 98 CCDS HistoryNCBI Gene:68375Re-query CCDS DB by CCDS ID:15967.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15967.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000070112.5 ENSMUSP00000065352.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000070112.5Link to Ensembl Protein Viewer:ENSMUSP00000065352.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000070112Re-query CCDS DB by Protein ID:ENSMUSP00000065352
Original member Current member NCBI NM_026703.3 NP_080979.1 Accepted alive Link to Nucleotide Sequence:NM_026703.3Link to Protein Sequence:NP_080979.1Re-query CCDS DB by Nucleotide ID:NM_026703Re-query CCDS DB by Protein ID:NP_080979Link to BLAST:NP_080979.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080979.1 172 Q9DCJ5 172 100% 0 0

Chromosomal Locations for CCDS 15967.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 36036504 36036641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 36039712 36039877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 36044350 36044513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 36049192 36049242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (519 nt):
ATGCCGGGGATAGTGGAGCTGCCAACTCTGGAAGAGCTGAAAGTGGAGGAGGTGAAAGTCAGCTCAGCTG
TGCTTAAAGCTGCCGCCCATCACTATGGGGCTCAGTGCGATAAAACCAATAAGGAGTTTATGCTGTGCCG
CTGGGAAGAGAAGGACCCAAGGCGCTGCCTGAAGGAGGGCAAGCTGGTCAACGGCTGTGCGCTGAACTTC
TTCAGGCAGATAAAGAGTCACTGTGCGGAGCCTTTCACAGAGTACTGGACTTGCCTTGATTACTCCAACA
TGCAGCTGTTTCGTCACTGCCGCCAGCAGCAGGCAAAGTTTGACCAGTGTGTGCTGGACAAACTGGGCTG
GGTGAGGCCGGACCTGGGGCAGTTGTCTAAGGTCACCAAAGTGAAAACAGATCGTCCTTTGCCAGAGAAT
CCTTATCACTCAAGAGCAAGGCCAGAGCCCAACCCTGTGATTGAAGGGGATCTGAAACCCGCCAAGCACG
GCACCCGCTTTTTTTTCTGGACCGTGTAG

Translation (172 aa):
MPGIVELPTLEELKVEEVKVSSAVLKAAAHHYGAQCDKTNKEFMLCRWEEKDPRRCLKEGKLVNGCALNF
FRQIKSHCAEPFTEYWTCLDYSNMQLFRHCRQQQAKFDQCVLDKLGWVRPDLGQLSKVTKVKTDRPLPEN
PYHSRARPEPNPVIEGDLKPAKHGTRFFFWTV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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