NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS24751.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24751.1 Public Mus musculus 11 2810021J22Rik 23 108 98 CCDS HistoryNCBI Gene:69944Re-query CCDS DB by CCDS ID:24751.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 24751.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000073924.9 ENSMUSP00000073579.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000073924.9Link to Ensembl Protein Viewer:ENSMUSP00000073579.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000073924Re-query CCDS DB by Protein ID:ENSMUSP00000073579
Original member Current member NCBI NM_172403.2 NP_765991.1 Accepted alive Link to Nucleotide Sequence:NM_172403.2Link to Protein Sequence:NP_765991.1Re-query CCDS DB by Nucleotide ID:NM_172403Re-query CCDS DB by Protein ID:NP_765991Link to BLAST:NP_765991.1

Chromosomal Locations for CCDS 24751.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 58868992 58869006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 58876694 58876820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 58878776 58878868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 58879929 58881313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1620 nt):
ATGAGCAGTATTGTGGGGTTGGTGTCATTTGAGGATGTGTCTGTGGACTTCACCTGGGATGAGTGGCAGG
ACCTGGATGACAGTCAGAGGAAGCTCTACAGGGACGTGATGCTGGAGACCTACAGCAGCCTGCTGTCCTT
GAATCAGTGTGATGCCAAACCTGAGTTGATCCTGAAGTTGGAGCAAGGAGCTGGGCCATGGAAGGAAGAC
AATGCCCCAGACCAGAGCCTCCCAGCTCTGCAGCCTATGAAGAGTCTGAAGGAAGCCAGAAGGGACACTG
GGAAGAAACATTTGAGCCACCTGCTAGTCACTGGCAGTGCATCAGCTGAGGAGAGGGGCAGACTTGGGGA
AATACTTAGTATGAATTCAAACCATGTTTTGCACCTGGCTCTTAAGACTAGGAGCACTTCTAGAATGAGA
TCTGAGGTGCTTGATACATGGGGAGATGTGTATCTCCCTGGTGGGCCCATTGAGATGCAGGCTACAGAGG
AACTTGATCATCTTAATCCAAGTAAGATGCTACCCAGACCTCCCGCGCCTCTTAGTCTGGACTTCAGTGC
TGAACGTGGACCACAGCACGGCCAGTGTGCCCAGCATGGCGAAGCCTTCGATGTGCGCACTGTATGGACG
CGTACAGTGTTTCCTTTGGGAGACAGCTCGACGAATGCCTTTGATAAGTTGGCTCTTACTGCCCAAGAGG
GGACTCACATAAGGGAGGAAACTTTTGATTGTAACATGTGTAAGAAGCCATTCTCTGACACGTGTAACCA
CACTCGGCATTTAAAACCACACCTGAAAAAACAGTGTGGTAAGTGTCCTGACGGCGAGCCAGCATTCCGT
GCGAAAGCAGGCCTTCAGCACACTCTGCACTCGTGGGGAAAACCGCGTGGGTGTAACGACAACAAGAAGT
GTGTGCATCAGATGCCGAAACCGAGGTCGAATCAGAGTGTCTTCTCCAGTAAAGAGAGTAATTGTGTGAA
AACATTTTGCCCAGACTCAACTTTGAGTGTACAGCAGAGGCCACATACAGGTAAAAAGCCCCAGGAGTCC
AGTACACCTGTAAAAATCAACAGCCAGCCTCGTCGACGTCACAGATGTGGGAGGACCTATCAGTGTAAAG
TATGTGGGAAAGCCTTTAAACACACGCAAAATCTCTATTTACACCACAGAACCCACACTGGGGAGAAGCC
CTATGAGTGTAAAGAGTGTAAGAAACTATTCAGCGTAAAGTCAAATCTCAGTGTGCATCAGAAAACCCAC
ACAGGCGAAAAACCCTATGAGTGTAATATATGTGGAAATGCCTTTAAAAGGAGGTGTGACCTAACTATCC
ACCAGAGAGTCCACACAGGCGAGAAGCCCTACGAATGTAAAGAGTGCAGGAAAACTTTCAGTATAAAGTC
AGGGCTCATTGTACATCAGAGAATCCACACGGGTGAGAAACCGTATGAGTGCAGTGTCTGTGGGAAACGT
TTCAACCAGAAGTCAAATCTCTCCACACATGAGAAAATCCACACAGGTGAGAAACCCTTTGAATGCAAAG
AATGTAGCAAAGCATTTAGTGTCAAGTCCTATCTCACTATCCATCAGAAAACTCACGTGGGTGAGAAACC
TCACTCGTGA

Translation (539 aa):
MSSIVGLVSFEDVSVDFTWDEWQDLDDSQRKLYRDVMLETYSSLLSLNQCDAKPELILKLEQGAGPWKED
NAPDQSLPALQPMKSLKEARRDTGKKHLSHLLVTGSASAEERGRLGEILSMNSNHVLHLALKTRSTSRMR
SEVLDTWGDVYLPGGPIEMQATEELDHLNPSKMLPRPPAPLSLDFSAERGPQHGQCAQHGEAFDVRTVWT
RTVFPLGDSSTNAFDKLALTAQEGTHIREETFDCNMCKKPFSDTCNHTRHLKPHLKKQCGKCPDGEPAFR
AKAGLQHTLHSWGKPRGCNDNKKCVHQMPKPRSNQSVFSSKESNCVKTFCPDSTLSVQQRPHTGKKPQES
STPVKINSQPRRRHRCGRTYQCKVCGKAFKHTQNLYLHHRTHTGEKPYECKECKKLFSVKSNLSVHQKTH
TGEKPYECNICGNAFKRRCDLTIHQRVHTGEKPYECKECRKTFSIKSGLIVHQRIHTGEKPYECSVCGKR
FNQKSNLSTHEKIHTGEKPFECKECSKAFSVKSYLTIHQKTHVGEKPHS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH