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Report for CCDS51066.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51066.1 Public Mus musculus 3 Zgrf1 23 108 98 CCDS HistoryNCBI Gene:71643Re-query CCDS DB by CCDS ID:51066.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 51066.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000043108.8 ENSMUSP00000044432.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000043108.8Link to Ensembl Protein Viewer:ENSMUSP00000044432.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000043108Re-query CCDS DB by Protein ID:ENSMUSP00000044432
Original member Current member EBI ENSMUST00000196141.4 ENSMUSP00000143761.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000196141.4Link to Ensembl Protein Viewer:ENSMUSP00000143761.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000196141Re-query CCDS DB by Protein ID:ENSMUSP00000143761
Original member Current member NCBI NM_197997.2 NP_932114.2 Accepted alive Link to Nucleotide Sequence:NM_197997.2Link to Protein Sequence:NP_932114.2Re-query CCDS DB by Nucleotide ID:NM_197997Re-query CCDS DB by Protein ID:NP_932114Link to BLAST:NP_932114.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_932114.2 1863 Q0VGT4-1 1863 100% 0 0

Chromosomal Locations for CCDS 51066.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 127555365 127555385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127556193 127556273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127559571 127559630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127560896 127561081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127561475 127563218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127567628 127567701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127573140 127573325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127581446 127581569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127583584 127584170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127584656 127584794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127586019 127586203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127587941 127588137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127589969 127590108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127595879 127596022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127598701 127598815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127600980 127601239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127602398 127602557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127606369 127606446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127608485 127608632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127611784 127611911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127613343 127613466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127615127 127615303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127615437 127615571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127616259 127616520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127616667 127616803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5592 nt):
ATGGAATGTCAAGAGTTTATTGTCCTATATACTCATCAAAAGATGAAGAAGTCCAAAGTGTGGCAAGATG
GAGTTCTGAAGATCACTCACTTAGGCAATAAGGCGATTTTATATGATGACAAAGGAGCATGTTTGGAAAG
CCTGTTTCTTAAGTGCCTTGAGGTGAAACCTGGAGATGACTTGGAAAGTGAGCGGTATTTAATCACAGTT
GAGGAGGCTAAGGCTGTTGGAAGCAGAGCTGTTGAACCGGATGGCTCTAGAGAAGCACTGGAGTCAGGCT
CAAGGACGCTTGTATCCTCCAGCAGGTCTCTTGGGTGTCAGCCCTCTGGCTTAAAAAGGAAGGCTACTGG
TTTTCAAAGACCATATAAGATGCCAAAGAAAGTGACTATTACTGAGAACAGTGAACCTGCTGCCTCACTT
GGTGATGAGAACCCTGGCCCGCCTGGCCCGAGACTTCTTCCCACATTCTCCAGCACACTTCCTTTGTTTC
CCACTGTTGGTCAGAAAGATTTAACTCCTGTGTCAACGGATAATCAGAGTCCCATCACATTCAGCAACAG
AGAGAGAAGCGACACACCTTTATCACTTCCTTCTTCATACTTCAAGATTAACACAAACACACTAGGTAAA
GAGGACAAGCTTTGCTTTCCTGTCAGTTCTGAAACCAAACATTCAGACTCTTTACTGGCCAGTGAACCCA
TGAGAAGAAATGGTTTAGACTCTCACTGTCCTGGAGTTTCACAAAACGTCAGAAGCAAAGCCCAGATATT
AGCTCTTCTGAAGTCCAGCTCAACTAACAGGAAGGATCTGCATGGTGAGATTCCAGGACACTTTCCTAAG
ATAGAACCACAGGGGTGTTTGAATATTATTTCTAAGCCAGAGGAAGACTATGCAGAAACACAGAGCATAG
GGAATTTACGCTGTGAGCAGCAGTCAGAAAATCCTACAAGAACCACAAGCCGGTGGGCCAGGTATTTACC
TTCCCAGAGATCACCTCCCTGTTCTGCTGCAGATGAGAATGATACAGAGGACAAACCAGAAGCCCAAGAA
GATGTGAACATTTTTAACTTGTCTGAACTTTTACAAAAAAAGTCAGAGCTCTTTGAAACATGTTCCAAAA
AGGGAGAATTACACAGTGAGGACAAGCCAGTAGATAATACTTGCCAATACTGGAATCAGGAGGATAACTT
AGCACCTTCATTCTGTAAGAACAGCAGTGTCCTGGTTAGCTGCAGCAGTAAAGAGAATGCCAGTTTATTA
TCAGAATCTGACATTCAGTACAGTAGCAAAGTACCAGTTAATCAACATGAGAAGGTGTGGACTCGAGAAG
GTTCTCAGGGGGCAGATGCGGATGCAGCATTGGAACCGGAGTATAGACCAGTGTCACCTTTGCCAGAAAT
AGGACATAAACAAACTGAAGTTGAAGCTTCTCTAAGTACCAGCTCTAGGATCTCTGACGACATTGCTGAC
ATGGGTTCTAAAAGCAATGCTGATAGAGAAGATCTGAAAACTGTTCATAAAGCTGTGCAACCATTTTTGG
AGGTTTCTTTTAATCTGAGCAACTTTGAGACCAGTGACACTGATGAGGCGTCACAAGAAGACAGCAGACT
TTCCCAGGATTCAGAGCGGTGGGAGAAGGAAGCTGTGCTTACAGATGATTCTTGTGTTCAGAAGAGCTGT
GAGGATATAGGCTGCCGAGAAATTGTAGGAAAATTGCCACTCCTGTCATCTACCGATGACGAGCCTAAAG
AGGCCCTCCCTGCTGATGGGACTCTGTTGTCAGAGTTCTGTGATAGAACCTGTGTGGGTTTCAATTCAGG
ACCTCATGGAGATGTAAAAACTGGCAAAGCACTAGAGGGACAGTGTCATAGTGACACAGGGAGCAGTTTG
GACTCGTCGCTGGAGTGGAGTGAGGATGTAGCAGGGGACAGCAGAGAAGATGCTAGTCAATCTATCCAAG
GCAATGCAATTAATTGTGGTGGTGTTTCACCCTCAAAGAAACCCAGAGGTGTAAACAGAAGCTTATACAG
TCCTTATCTTCTAACCGCAGTCACTGACCCAGCGCCTGAGAACAGTGACCTGCTCTCAGAAGCCAGGAAA
TCACCTGCCATAGAAGTTTCGCGTGCTCTGCTAGAGTGTCCTTGTGAGCATCGGGCTTCTCAGCAGCCTG
TTGAGTTTCAAGGACATCAGGTGAAAGGATCCGCTACTAGTGGTGTAATGGTCAGAGGACACAGCTTACA
GCGAGGATGCACTCAGTTTCCAGACAGCATTGACTATGAAAACTTCCTGACTGATACTTGTGTTTGGACA
CCAGGATTGCCTAGCACTTATGGGCAGACGGACTTCTTGCAGGTGATTTCTCCAGAACAAAAGATCCCTG
CATTGAGCCCTGCACCTACTTTTTCTTTCAACACAAGAAATGAAGACACTGTGCTTGAGCTCTCTGAGGA
GTCTCTGAAAACAAGAACTCTCCCTGGATTGAAAACCATTGGTTTCCAGGACAGTAAGAACCTCCAACGG
TTTCCGTTTCTAAGTGGAGCCTCAGCTCCCTTTGCCACTTTGCCAGCTGATGATGGCCCAGCTGTCTTAG
ATCCCTGTTCATTCATGATTGATGATGACGCGCGAGAGCCTTCTGGTTCTTCCATGTTGAACCTGTGTGA
AGAGTCAGGTCTTTCATTCGACCTTGGACTTGAGGGCCAGGGTGGGACTCCAGGAGGTGTTTCACTGCTT
CCTAAGAGTTCTACTCAAAGCAAGTGGCTGAAATATCAAAACCCACCCCAGTGCAACTCAACTGCTCCGA
ACAGACTTGCCAGCGAGGTGACCGAGGGTCTCTTTGCTGAAGCGGTGTCTGGCTTGCATTTTAGCCACAC
AAGTGAGAGTGAAAGTTCTGTTGACCCTGTGCGCCTGCAGATGATAAAAGGCTTGCTCCATCAACAGCAG
CAGGATTTGGTTTCCAGAAAGCAAGCTTTTTCTCTGACTTTAAATCAGACTTGCAAGACTCAGGAACATG
AGACTGTGTTAGGAAGCTCTGCCAGCAAGAACTGCAGAGCCAAAGATCTACAGGAGATAAATAATTCTGA
TCTGTGCTTCCCAAATGGGCAGAAAATAATATCAGCTTATCTCCCACAAAGGCAAGTTCACATACCTGCT
GTTTTCCAGTCTCCTGCTCACTATAGGCAGGTCTTTACAGCTTCCATCATAGAGCATCTGAATATATTGC
TGTTTGAATTGGCACAAAGGCTGTACAAAGCACTTTCCAAAGTTGACATATCCTTTTATACATCGTCAAA
AGGAGAGACAATGAGAAGTGGAAAAAATAATTCACCATCCTGCCACCATAATCAACCTGCCAAGCTTGTC
ATGGTTAAAAAAGAAGGTCCAAATAAGGGCCGTCTCTTTTATACATGTGATAAGTCAAAAGATAATCAAT
GTAAATTTTTCAAATGGCTTGAGGAAGTGACTCCAGGACAGTTACCACAGAATACGTCTCAATCCACCAT
GGTTTTTAATGATATTAAGAGTATTGGCTCATATTTAAGAAGTCAAAAGGTACCAGTCTATGAAGAATGC
CAGCTTTTGTTGAGGAGAGGATTTGATTTTCAGAGAAAACAGTGTGGTAAACTAAAGAAGCTAACTACTG
TAAATCCTGACTTTTACAGTGAAACAAAAAGTAAGATTTATCTTAAGCTGAGTCGGAGGGAGAGCTCTTC
AGTTTATAGTAAAGGTGATCTTTGGGTTATTTCAAAAACCCTAGACTTTGAACTAGATACTTTCATTGCA
TGCAGTGCCTTCTTTGGGCCATCTTCTGTCAATGAAGTGGAGCTGCTGCCTTTGAAAGGTTATTTCCCTT
CTAATTGGCCCACCAACATCACAGTCCATGCATTGTTGGTTTGTAATGCCAGCACAGAGCTGACAACTCT
ACAGAACATTCAGGACTACTTTAACCCAGCTGCTCTTCCACTAATGCCATACCTGCTAGCAATGTCTCAG
TCAGCTACAGTTAGCAGTAAAAATATCAGTAAAAGAAAATTTATCCCACCAGCCATTACAAGCATTAAAA
CAAAAACGGAACTCCACCTTGGAGCGACCCTGCAGTTAGCTAGGGAGTTGATTAACGTACACAGGTTGAA
CAAGGACCAAGCTACAGCACTAATTCAGATAGCTCAAATGATGGCATCCCAAGGAAGTGATGAAGATGCC
CTGGAGCCCTTCGGCCATTCCCTGCCTATCACAGTCATTCATGGTGTTTTTGGAGCAGGCAAAAGCTATT
TGCTGGCTGTGGTGATTCTGTTCTTGGTAGAGCTGTTTGAAAAGTGTGATTCTGGAACAGTTGGCAATGC
AAGGCCATGGAAAGTCCTCGTTTCTTCTTCCACTAACGTAGCTGTTGACAGAGTGCTTCTTGGGCTTCTC
AGTCTTGGATTTGAAAAGTTCATCAGGGTTGGAAGTGTTAGGAAGATCGCCAAGCCAGTTTTACCCTACA
GCTTGCATGCTGGCTCAGACAATGAAAGTGAACAATTGAAGGAACTCAATGCACTGTTGAAGGAAGAACT
GACTCCTATTGAAAGAGTTTATGTCAGAAAAAGTATCGAGCAGCATAAGCTGGGAACCAACAGAGTCCTG
CTAAAGCAGGTCCGAGTGGTTGGCGTTACCTGTGCAGCCTGCGCATTCCCGTGTCTGAATGACCTTAAGT
TCCCCGTGGTTGTGCTGGATGAGTGCAGCCAGATGACAGAGCCAGCCTCCCTTCTTCCCATTGCAAGGTT
TCAGTGTGAAAAGCTAATTCTTGTTGGAGACCCCAAACAGCTGCCTCCTACAATTCAGGGTTCTGATGCA
GCTCATGAAAATGGACTGGAACAAACTCTCTTTGATCGGCTTTGCTTAATGGGCCACAAACCCGTTCTGT
TAAGAACCCAGTACCGTTGTCATCCTGCGATCAGTGCCATAGCTAATGATCTGTTTTATGAAGGAAGCCT
AGTGAATGGCATTTCCGAGAGAGAGAGAAGCCCTGTACTGGAGTGGCTGCCCACGCTGTGTTTCTATAAC
GTCACGGGAGCAGAGCAGGTTGAGAGAGAAAACAGCTTTGTGAATGTGGCAGAAGCCACGTTTACCCTCA
AGCTAATCCAATCACTGATGGCAAGTGGGGTAGAGAGCTGCATGATTGGGGTGATAACATTATACAAGTC
GCAGATGTACAAGATTTGCAATTTACTCAGTGCTGTGGACGTCGGCCATCCTGATGTTAAAGCTGTGCAG
GTGTCCACAGTGGATGCCTTTCAGGGTGCCGAGAAGGAAATCACTATTCTGTCCTGCGTGAGGACAAGAC
AAGTAGGGTTCATTGACTCAGAGAAACGAATGAACGTTGCTTTGACCAGAGGAAGGAGACACTTATTGAT
TGTAGGAAGTTTGTCCTGTTTGAGGAAAAATCGACTATGGGGGCGTGTGATCCAACACTGTGAAGGAAGG
GAAGACGGATTGCAGCATGCAAGCCAGTGTGAACCACAGCTGGACCATCTTCTTAAAGACTATTTAGAAA
AACAAGCAGAAGAAAAACAGAAAAAAAAGGAGAAAGAGAAATCAAAGGATAAATCTCATTAA

Translation (1863 aa):
MECQEFIVLYTHQKMKKSKVWQDGVLKITHLGNKAILYDDKGACLESLFLKCLEVKPGDDLESERYLITV
EEAKAVGSRAVEPDGSREALESGSRTLVSSSRSLGCQPSGLKRKATGFQRPYKMPKKVTITENSEPAASL
GDENPGPPGPRLLPTFSSTLPLFPTVGQKDLTPVSTDNQSPITFSNRERSDTPLSLPSSYFKINTNTLGK
EDKLCFPVSSETKHSDSLLASEPMRRNGLDSHCPGVSQNVRSKAQILALLKSSSTNRKDLHGEIPGHFPK
IEPQGCLNIISKPEEDYAETQSIGNLRCEQQSENPTRTTSRWARYLPSQRSPPCSAADENDTEDKPEAQE
DVNIFNLSELLQKKSELFETCSKKGELHSEDKPVDNTCQYWNQEDNLAPSFCKNSSVLVSCSSKENASLL
SESDIQYSSKVPVNQHEKVWTREGSQGADADAALEPEYRPVSPLPEIGHKQTEVEASLSTSSRISDDIAD
MGSKSNADREDLKTVHKAVQPFLEVSFNLSNFETSDTDEASQEDSRLSQDSERWEKEAVLTDDSCVQKSC
EDIGCREIVGKLPLLSSTDDEPKEALPADGTLLSEFCDRTCVGFNSGPHGDVKTGKALEGQCHSDTGSSL
DSSLEWSEDVAGDSREDASQSIQGNAINCGGVSPSKKPRGVNRSLYSPYLLTAVTDPAPENSDLLSEARK
SPAIEVSRALLECPCEHRASQQPVEFQGHQVKGSATSGVMVRGHSLQRGCTQFPDSIDYENFLTDTCVWT
PGLPSTYGQTDFLQVISPEQKIPALSPAPTFSFNTRNEDTVLELSEESLKTRTLPGLKTIGFQDSKNLQR
FPFLSGASAPFATLPADDGPAVLDPCSFMIDDDAREPSGSSMLNLCEESGLSFDLGLEGQGGTPGGVSLL
PKSSTQSKWLKYQNPPQCNSTAPNRLASEVTEGLFAEAVSGLHFSHTSESESSVDPVRLQMIKGLLHQQQ
QDLVSRKQAFSLTLNQTCKTQEHETVLGSSASKNCRAKDLQEINNSDLCFPNGQKIISAYLPQRQVHIPA
VFQSPAHYRQVFTASIIEHLNILLFELAQRLYKALSKVDISFYTSSKGETMRSGKNNSPSCHHNQPAKLV
MVKKEGPNKGRLFYTCDKSKDNQCKFFKWLEEVTPGQLPQNTSQSTMVFNDIKSIGSYLRSQKVPVYEEC
QLLLRRGFDFQRKQCGKLKKLTTVNPDFYSETKSKIYLKLSRRESSSVYSKGDLWVISKTLDFELDTFIA
CSAFFGPSSVNEVELLPLKGYFPSNWPTNITVHALLVCNASTELTTLQNIQDYFNPAALPLMPYLLAMSQ
SATVSSKNISKRKFIPPAITSIKTKTELHLGATLQLARELINVHRLNKDQATALIQIAQMMASQGSDEDA
LEPFGHSLPITVIHGVFGAGKSYLLAVVILFLVELFEKCDSGTVGNARPWKVLVSSSTNVAVDRVLLGLL
SLGFEKFIRVGSVRKIAKPVLPYSLHAGSDNESEQLKELNALLKEELTPIERVYVRKSIEQHKLGTNRVL
LKQVRVVGVTCAACAFPCLNDLKFPVVVLDECSQMTEPASLLPIARFQCEKLILVGDPKQLPPTIQGSDA
AHENGLEQTLFDRLCLMGHKPVLLRTQYRCHPAISAIANDLFYEGSLVNGISERERSPVLEWLPTLCFYN
VTGAEQVERENSFVNVAEATFTLKLIQSLMASGVESCMIGVITLYKSQMYKICNLLSAVDVGHPDVKAVQ
VSTVDAFQGAEKEITILSCVRTRQVGFIDSEKRMNVALTRGRRHLLIVGSLSCLRKNRLWGRVIQHCEGR
EDGLQHASQCEPQLDHLLKDYLEKQAEEKQKKKEKEKSKDKSH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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