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Report for CCDS35423.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35423.1 Public Homo sapiens X MAGEA9B 24 110 108 CCDS HistoryNCBI Gene:728269Re-query CCDS DB by CCDS ID:35423.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35423.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000595065.6 ENSP00000471017.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000595065.6Link to Ensembl Protein Viewer:ENSP00000471017.1Re-query CCDS DB by Nucleotide ID:ENST00000595065Re-query CCDS DB by Protein ID:ENSP00000471017
Original member Current member NCBI NM_001080790.1 NP_001074259.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001080790.1Link to Protein Sequence:NP_001074259.1Re-query CCDS DB by Nucleotide ID:NM_001080790Re-query CCDS DB by Protein ID:NP_001074259Link to BLAST:NP_001074259.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001074259.1 315 P43362 315 100% 0 0

Chromosomal Locations for CCDS 35423.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 149582232 149583179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (948 nt):
ATGTCTCTCGAGCAGAGGAGTCCGCACTGCAAGCCTGATGAAGACCTTGAAGCCCAAGGAGAGGACTTGG
GCCTGATGGGTGCACAGGAACCCACAGGCGAGGAGGAGGAGACTACCTCCTCCTCTGACAGCAAGGAGGA
GGAGGTGTCTGCTGCTGGGTCATCAAGTCCTCCCCAGAGTCCTCAGGGAGGCGCTTCCTCCTCCATTTCC
GTCTACTACACTTTATGGAGCCAATTCGATGAGGGCTCCAGCAGTCAAGAAGAGGAAGAGCCAAGCTCCT
CGGTCGACCCAGCTCAGCTGGAGTTCATGTTCCAAGAAGCACTGAAATTGAAGGTGGCTGAGTTGGTTCA
TTTCCTGCTCCACAAATATCGAGTCAAGGAGCCGGTCACAAAGGCAGAAATGCTGGAGAGCGTCATCAAA
AATTACAAGCGCTACTTTCCTGTGATCTTCGGCAAAGCCTCCGAGTTCATGCAGGTGATCTTTGGCACTG
ATGTGAAGGAGGTGGACCCCGCCGGCCACTCCTACATCCTTGTCACTGCTCTTGGCCTCTCGTGCGATAG
CATGCTGGGTGATGGTCATAGCATGCCCAAGGCCGCCCTCCTGATCATTGTCCTGGGTGTGATCCTAACC
AAAGACAACTGCGCCCCTGAAGAGGTTATCTGGGAAGCGTTGAGTGTGATGGGGGTGTATGTTGGGAAGG
AGCACATGTTCTACGGGGAGCCCAGGAAGCTGCTCACCCAAGATTGGGTGCAGGAAAACTACCTGGAGTA
CCGGCAGGTGCCCGGCAGTGATCCTGCGCACTACGAGTTCCTGTGGGGTTCCAAGGCCCACGCTGAAACC
AGCTATGAGAAGGTCATAAATTATTTGGTCATGCTCAATGCAAGAGAGCCCATCTGCTACCCATCCCTTT
ATGAAGAGGTTTTGGGAGAGGAGCAAGAGGGAGTCTGA

Translation (315 aa):
MSLEQRSPHCKPDEDLEAQGEDLGLMGAQEPTGEEEETTSSSDSKEEEVSAAGSSSPPQSPQGGASSSIS
VYYTLWSQFDEGSSSQEEEEPSSSVDPAQLEFMFQEALKLKVAELVHFLLHKYRVKEPVTKAEMLESVIK
NYKRYFPVIFGKASEFMQVIFGTDVKEVDPAGHSYILVTALGLSCDSMLGDGHSMPKAALLIIVLGVILT
KDNCAPEEVIWEALSVMGVYVGKEHMFYGEPRKLLTQDWVQENYLEYRQVPGSDPAHYEFLWGSKAHAET
SYEKVINYLVMLNAREPICYPSLYEEVLGEEQEGV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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