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Report for CCDS35179.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35179.1 Public Homo sapiens 9 DNLZ 24 110 108 CCDS HistoryNCBI Gene:728489Re-query CCDS DB by CCDS ID:35179.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35179.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371738.4 ENSP00000360803.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000371738.4Link to Ensembl Protein Viewer:ENSP00000360803.3Re-query CCDS DB by Nucleotide ID:ENST00000371738Re-query CCDS DB by Protein ID:ENSP00000360803
Original member Current member NCBI NM_001080849.3 NP_001074318.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001080849.3Link to Protein Sequence:NP_001074318.1Re-query CCDS DB by Nucleotide ID:NM_001080849Re-query CCDS DB by Protein ID:NP_001074318Link to BLAST:NP_001074318.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001074318.1 178 Q5SXM8 178 100% 0 0

Chromosomal Locations for CCDS 35179.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 136362012 136362180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 136362989 136363128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 136363487 136363714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (537 nt):
ATGCTGCGGACTGCGCTGCGCGGCGCGCCGAGGTTGCTGAGTCGCGTGCAGCCCCGGGCGCCCTGCCTGA
GGCGGCTGTGGGGCCGCGGGGCCCGTCCAGAGGTCGCGGGGAGGCGGCGGGCCTGGGCCTGGGGCTGGCG
GCGCTCAAGCTCCGAGCAGGGGCCGGGGCCCGCGGCGGCTCTGGGGCGCGTGGAGGCGGCGCACTACCAG
CTCGTCTACACCTGCAAGGTCTGCGGGACTAGGTCCTCCAAGCGCATCTCCAAGCTGGCCTATCACCAAG
GCGTGGTCATTGTGACCTGCCCCGGCTGCCAGAACCACCATATCATCGCTGACAACCTGGGCTGGTTCTC
GGACCTGAATGGGAAGAGAAATATCGAAGAGATCCTGACGGCCAGAGGCGAGCAGGTGCACCGTGTGGCG
GGCGAGGGGGCCCTGGAACTGGTTCTGGAGGCTGCAGGGGCCCCCACATCCACTGCAGCTCCGGAAGCGG
GTGAGGATGAGGGTCCCCCCAGCCCTGGCAAGACGGAGCCGAGCTGA

Translation (178 aa):
MLRTALRGAPRLLSRVQPRAPCLRRLWGRGARPEVAGRRRAWAWGWRRSSSEQGPGPAAALGRVEAAHYQ
LVYTCKVCGTRSSKRISKLAYHQGVVIVTCPGCQNHHIIADNLGWFSDLNGKRNIEEILTARGEQVHRVA
GEGALELVLEAAGAPTSTAAPEAGEDEGPPSPGKTEPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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