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Report for CCDS23463.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23463.1 Public Mus musculus 9 Nudt16l2 23 108 98 CCDS HistoryNCBI Gene:73532Re-query CCDS DB by CCDS ID:23463.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23463.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000035180.4 ENSMUSP00000035180.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000035180.4Link to Ensembl Protein Viewer:ENSMUSP00000035180.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000035180Re-query CCDS DB by Protein ID:ENSMUSP00000035180
Original member Current member NCBI NM_028562.3 NP_082838.2 Accepted alive Link to Nucleotide Sequence:NM_028562.3Link to Protein Sequence:NP_082838.2Re-query CCDS DB by Nucleotide ID:NM_028562Re-query CCDS DB by Protein ID:NP_082838Link to BLAST:NP_082838.2

Chromosomal Locations for CCDS 23463.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 105143440 105143649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 105144435 105144704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 105144788 105144928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (621 nt):
ATGGCCACGCCCACTAAGATAGACTTGGAGGACGCCCTGGCCCTGGGGCCCAGCTGGCGGCATCTTTGTC
ACGTGATGCTGTATGCGCCCGATCCAGGGGTGCTCTTTGGTGGCCGTATCTTGCTGAACTATGCTGTGCT
GATGTCCATGCGCTTTGATGGGCGACTGGGCTTCCCTGGTGGTTTTGTGGACGATCGTAGCCCCAGCCTG
GAGGAAGGGCTGAATAAGGAACTGTTGAAGAAACTGGGCGAGGGAGTGTCCACTTTCAGCATCTTATCCA
CCGACTACCGAAGCTCCCTCGCTGAGTCCAAATCAAAAGTGGTGGCCCATTTCTATGTCAAATGCCTAAC
ACTAGAGCAGCTCCAGGCGGTGGAGGCTGGGGCACCACAAGCCAAGGACCATGGGCTAGAGGTCTTGGGC
CTGGTGCGGGTACCCCTGTACACCTTGCGGGATGGTGTGGGAGGCCTGCCTGCTTTTCTGGAGAATTCCT
TCATTGGTGTCGCCAGGGAACAGCTACTGGAAGCCCTCCAGGACTTGGGAATTCTGGCTCCCGAAACTGC
CTCAGACCTCAAGGAACGAACAGTTCAACGTAAACAGACCTTAAGGCTGATTGGGACCTGA

Translation (206 aa):
MATPTKIDLEDALALGPSWRHLCHVMLYAPDPGVLFGGRILLNYAVLMSMRFDGRLGFPGGFVDDRSPSL
EEGLNKELLKKLGEGVSTFSILSTDYRSSLAESKSKVVAHFYVKCLTLEQLQAVEAGAPQAKDHGLEVLG
LVRVPLYTLRDGVGGLPAFLENSFIGVAREQLLEALQDLGILAPETASDLKERTVQRKQTLRLIGT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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