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Report for CCDS40764.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40764.1 Public Mus musculus 9 Uba7 23 108 98 CCDS HistoryNCBI Gene:74153Re-query CCDS DB by CCDS ID:40764.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 40764.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000035216.10 ENSMUSP00000035216.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000035216.10Link to Ensembl Protein Viewer:ENSMUSP00000035216.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000035216Re-query CCDS DB by Protein ID:ENSMUSP00000035216
Original member Current member NCBI NM_023738.4 NP_076227.1 Accepted alive Link to Nucleotide Sequence:NM_023738.4Link to Protein Sequence:NP_076227.1Re-query CCDS DB by Nucleotide ID:NM_023738Re-query CCDS DB by Protein ID:NP_076227Link to BLAST:NP_076227.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_076227.1 977 Q9DBK7 977 100% 0 0

Chromosomal Locations for CCDS 40764.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 107975685 107975713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107975797 107975965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107976055 107976189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107976306 107976412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107976710 107976800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107976904 107977039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107977131 107977228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107977329 107977475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107977852 107978022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107978209 107978316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107978465 107978545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107978626 107978781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107978856 107979021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107979100 107979305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107979394 107979458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107979544 107979691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107979763 107979837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107980029 107980182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107980877 107980959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107981204 107981296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107981390 107981581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107983097 107983189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107983263 107983363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107983817 107983946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2934 nt):
ATGGATGAAGAGTTATACTCCAGGCAGCTGTATGTACTGGGCCTGCCTGCTATGCAGAGGATCCAGGAAG
CCAAAGTCTTGCTATGTGGCCTGCAGGGTCTGGGAGCTGAGGTGGCCAAGAACCTAGTCCTTACAGGTGT
GGGCAGCCTCACCCTGCATGATCCCCATCCCACCTGCTGGGCTGACTTGGCTGCTCAGTGTTTCCTTTCA
GAAGAGAGCTTGGGAAGGAACAGGGCTGAGGCCTCTCAGGCGCAATTGGCTCAGCTCAATGAAGCTGTCC
AGATCTCCGTCCACAGTGGCGACATCACTGAGGACCTACTGCAGGGTTTTCAGGTAGTGGTGCTGACTGA
CTCCAAGCTGGAAGACCAGCTGAAGGTGGGACCTTTGTGTCACAAGCATGGAGTCCGCTTCCTGATGGCT
GAAACCCGGGGCCTTGTGGGGCGGTTATTCTGTGACTTTGGTGAGGACTTCACAGTTTTGGACCCTACTG
AGGTAGAACCCATGACAGCTGCCATCCAGGACATCTCTCAGGGTTTCCCCGGCATTGTCACCCTGAGAGG
AGACACCAAAAGACATTCCTTCCACGATGGGGACTTGGTGATTTTCTCAGACATTGAAGGCATGGTTGAA
CTCAACAGTTGTTCTCCACAGTCTGTCCGTGTGCAGAAAGACGGGTCCTTGGAGATTGGAGATACGACAA
CTTTCTCCCGTTACTTGAGAGGTGGGGTTGTCACCGAAGTCAAGAGACCCAAGACCGTGAGGCATAAGCC
CCTGGACATAGCTCTGCTTCAGCCCCATGTGGTGGCTCAGAATACTCAGGAAGTACAGCGTGCTCACTGC
CTACATCAGGCCTTCCATGTACTGCACAAGTTCCAGCAACTTCATGGCCGGCTACCCAAGCCATGGGATC
CTGATGATGCAGAGACTGTGGTGGAGCTGGCCCAGGACCTGGAGCCACTAAAAGGGACAGAAGAAGAGTC
ACTGGATGAGGCTCTCCTCCGCACAATTGCCCTGAGTAGTGCTGGTACCTTAAGCCCCATGGCAGCCATT
ATGGGAGGAGTGGCTGCTCAGGAGGTCCTAAAGGCCATCTCCAGGAAGTTCATGCCCCTGGATCAGTGGC
TGTACTTTGACGCCCTTGAATGTCTTCCAGAAGATGAGACGCTCCTTCCCAGCCCTGAGGATTGTCAGCC
AAGAAACTGCCGATACGATGGGCAAATTGCTGTGTTTGGAACTGATCTTCAAGAGAAACTGAGTGACCAA
CACTACCTCTTGGTGGGTGCTGGTGCCATTGGCTGTGAGATGCTCAAAGTCTTTGCCCTAGTGGGCCTCG
GAGTTAGGGCGAATGGAGGTGTGACTGTTGCTGACATGGATTACATAGAACGCTCCAACCTCAGCAGGCA
GTTCCTCTTCAGGCCCAAGGATGTTAGAAGGCCCAAGGCAGAGGTGGCCGCCGCAGCAGCCCATCGTCTC
AACCCAGACCTACGAGCGACTCCATATACCTGCCCACTGGATCCCACCACAGAGGATATCTACGATGACA
GCTTTTTCTCCAGGGTGAACGGTGTTGTTGCTGCTTTGGACAGCTTCCAGGCCCGGCACTATGTCGCTGC
TCGATGCACCCACTATCTGAAGCCACTGCTGGAGGCCGGCACCCAGGGCACCTGGGGGAGTGCTTCAGTG
TTTGTGCCCTATGTGACAGAAGCCTACAGAGGTCCTGCCTCGGATGCAGCTTCTGAGGATGCTCCCTACC
CTGTGTGTACCCTGAGGCACATCCCCAGCTCGATGGAGCACAGCGTGCAGTGGGCCCAGGATCAATTTGA
GGGACTCTTCAGACTATCTACAGAGACCATCAACTGCTACCAACAGACATGCACTTCCCTGTCGGCCACG
GATAGGACAGAGACACTGGCCTTACTGCAGCAAGTGATGGGTGTCCTGAGAACTCGCCCACAGACCTGGC
AAGACTGTGTGGTGTGGGCTCTTGGCCACTGGCAACTGTGCTTCCATGATAAAGTGCTTGAGGGTGGAAC
TCAGTTCTCATCAGGATCCAACAAGTGTCCACATCCCTTGCAGTTTGACCCCAACCACGACATGCATTTC
CTCTACGTACTGGCAGCTGCCAACCTGTATGCACGGATGCATGGGCTGCCTGGCTCACAAAGTCAGCCTG
CACTCAGGGAACTGCTGACGCGGCTGCTAGAGTCTGATTCCAGGCCCCAGAACCTCTTCTCTGCTGAGCA
TGGCCAGGAACAGTTGAAGGAACTGCAGGAAACCCTGGACGACTGGAGGAAGGGGCCCCCGCTGAAGCCT
GTGCTGTTTGTGAAGGATGATGACAGCAACTTCCATGTGGACTTTGTGGTAGCAGCGACAGACCTGCGAT
GTCAGAACTACGGGATCCTACCAGTTAATCATGCTCGGATCAAGCAAATCGTGGGCCGGATTATCCCAGC
CATTGCCACCAGTACAGCAGTTGTGGCAGGCTTACTGGGCCTGGAGCTGTATAAGGTGGTAAGCGGGCTC
CGATCCCATGGTACCTTTCGTCACAGCTATCTGCACCTGGCTGAAAACCACTTCATCCGCTCAGCGCCTT
CTGCCCCAGCCGTCCAGTCGTTCCGTGACCTGAAATGGACCTGTTGGGACCGCCTGAAGGTGCCCGCTGT
GCAGCCTGAAAGGACACTGAAGTCACTGCTGGCCCATCTCCAGGAAGAACATGGACTGAAGGTGGAGATG
CTTCTCCACCACCAGGCTCTGCTCTATTCTTCAGGATGGTCATCTGAAAAGCAGGCTCAACACCTGTGCC
TCAGGGTGACAGAACTGGTTCAGCACGTGACCGGCTGGAAGCCCAAGCCTGGGCTGAAGGTTCTGGTGTT
TGAGCTGAGCTGTGAGGGCGAGGAGGAAGAAATGGCCTTCCCACCTCTGCATTATGAGCTGTGA

Translation (977 aa):
MDEELYSRQLYVLGLPAMQRIQEAKVLLCGLQGLGAEVAKNLVLTGVGSLTLHDPHPTCWADLAAQCFLS
EESLGRNRAEASQAQLAQLNEAVQISVHSGDITEDLLQGFQVVVLTDSKLEDQLKVGPLCHKHGVRFLMA
ETRGLVGRLFCDFGEDFTVLDPTEVEPMTAAIQDISQGFPGIVTLRGDTKRHSFHDGDLVIFSDIEGMVE
LNSCSPQSVRVQKDGSLEIGDTTTFSRYLRGGVVTEVKRPKTVRHKPLDIALLQPHVVAQNTQEVQRAHC
LHQAFHVLHKFQQLHGRLPKPWDPDDAETVVELAQDLEPLKGTEEESLDEALLRTIALSSAGTLSPMAAI
MGGVAAQEVLKAISRKFMPLDQWLYFDALECLPEDETLLPSPEDCQPRNCRYDGQIAVFGTDLQEKLSDQ
HYLLVGAGAIGCEMLKVFALVGLGVRANGGVTVADMDYIERSNLSRQFLFRPKDVRRPKAEVAAAAAHRL
NPDLRATPYTCPLDPTTEDIYDDSFFSRVNGVVAALDSFQARHYVAARCTHYLKPLLEAGTQGTWGSASV
FVPYVTEAYRGPASDAASEDAPYPVCTLRHIPSSMEHSVQWAQDQFEGLFRLSTETINCYQQTCTSLSAT
DRTETLALLQQVMGVLRTRPQTWQDCVVWALGHWQLCFHDKVLEGGTQFSSGSNKCPHPLQFDPNHDMHF
LYVLAAANLYARMHGLPGSQSQPALRELLTRLLESDSRPQNLFSAEHGQEQLKELQETLDDWRKGPPLKP
VLFVKDDDSNFHVDFVVAATDLRCQNYGILPVNHARIKQIVGRIIPAIATSTAVVAGLLGLELYKVVSGL
RSHGTFRHSYLHLAENHFIRSAPSAPAVQSFRDLKWTCWDRLKVPAVQPERTLKSLLAHLQEEHGLKVEM
LLHHQALLYSSGWSSEKQAQHLCLRVTELVQHVTGWKPKPGLKVLVFELSCEGEEEEMAFPPLHYEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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