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Report for CCDS22334.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22334.1 Public Mus musculus 8 Tktl2 23 108 98 CCDS HistoryNCBI Gene:74419Re-query CCDS DB by CCDS ID:22334.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22334.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000002025.4 ENSMUSP00000002025.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000002025.4Link to Ensembl Protein Viewer:ENSMUSP00000002025.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000002025Re-query CCDS DB by Protein ID:ENSMUSP00000002025
Original member Current member EBI ENSMUST00000183187.1 ENSMUSP00000138388.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000183187.1Link to Ensembl Protein Viewer:ENSMUSP00000138388.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000183187Re-query CCDS DB by Protein ID:ENSMUSP00000138388
Original member Current member NCBI NM_001271574.1 NP_001258503.1 Accepted alive Link to Nucleotide Sequence:NM_001271574.1Link to Protein Sequence:NP_001258503.1Re-query CCDS DB by Nucleotide ID:NM_001271574Re-query CCDS DB by Protein ID:NP_001258503Link to BLAST:NP_001258503.1
Original member Current member NCBI NM_028927.3 NP_083203.2 Accepted alive Link to Nucleotide Sequence:NM_028927.3Link to Protein Sequence:NP_083203.2Re-query CCDS DB by Nucleotide ID:NM_028927Re-query CCDS DB by Protein ID:NP_083203Link to BLAST:NP_083203.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001258503.1 627 Q9D4D4 627 99.8405% 0 1
NP_083203.2 627 Q9D4D4 627 99.8405% 0 1

Chromosomal Locations for CCDS 22334.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 66511792 66513675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1884 nt):
ATGGCCTTGGCCAGAGATGCCAAGCTGGAGTCGGACACCTTTCAGGTGCTTCAGGACGTGGCCAATCGCC
TGCGAATCCACTCAATCAGGGCCACGTGTGCCTGCAGCTCCGGACATCCCACGTCGTGCTGTAGTGTGGC
AGAGATCATGGCTGTGCTCTTCTTCCATACCATGAGGTACAAACAGGCAGACCCAGAACACCCGGACAAT
GACCGCTTTGTCCTCTCCAAGGGCCACGCCGCGCCCATCCTCTATGCGGTTTGGGTGGAGGTGGGCCGTA
TCTGTGAATCGGACTTGCTGAACTTGCGAAAAATTCACTGCGACCTGGAGGGTCATCCCACCCCACGACT
GTCGTTTGTTGATGTGGCAACAGGGTCCCTTGGGCAAGGACTGGGTGCTGCCTGTGGAATGGCTTACACC
GGCAAATACTTTGACAAGGCCAGCTACCGCGTGTTCTGCCTCATGGGGGATGGTGAGTCCTCGGAAGGTT
CTGTCTGGGAGGCCTTGGCCTTTGCTTCCCACTACAACTTGGACAATCTCGTGGCAATCTTTGACGTGAA
CCGCTTGGGACAAAGCGGCACAGCACCCCTAGAGCACTGTACAGCCGTTTATGAGAAGCGCTGCCAAGCG
TTTGGGTGGAATACTTACGTGGTGGATGGTCATGATGTTGAAGCTCTCTGCCAGGCCTTTTGGAAAGCAG
CTCAAGTCAAGAATAAGCCTACTGCCCTGATTGCCAAGACCTTCAAGGGTAGAGGTATTCCAAATGTCGA
GGATGCGGAAAATTGGCATGGAAAGCCTATGCCAAAAGACAGAGCTGATGGGATTGTCAAATTAATTGAG
AATCGGATACAGACAAACCGAAATCTCACACCGAAACCCCCCATTGAAGACTCGCCCAGGATCAGCATGT
CCAATACAAAAATGACCTCTCTGCCTGTCTACAAACTGGGAGACATGATAGCTACTCGTGAAGCATACGG
CTTGGCTCTGGCTAAATTGGGCCAATCTAACCAAAGAGTTATCGTTCTAGATGGCGACACAAAAAACTCT
ACCTTTTCAGAAGTATTCAAGAAAGAGCACCCTGAGCGTTTCATAGAGTGCTTTATCGCTGAGCAAAACA
TGGTAAGTGTGGCCCTGGGGTGTGCCACACGAGGACGAACTATTGCTTTCGTTAGTACCTTTGCTGCCTT
CCTGACCCGAGCCTTTGATCAGATCCGAATGGGAGCCATCTCTCAAACCAACATCAACTTCGTTGGTTCC
CACTGCGGGGTGTCTGTTGGAGAAGACGGACCTTCCCAGATGGCCCTGGAGGACCTAGCCATGTTCAGAA
GCATCCCCAACTGCACTGTTTTCTATCCAAGTGATGCTGTCTCGACAGAACACGCTGTTTATCTGGCAGC
CAACACGAAGGGAATGTGCTTCATTCGTACCACTCGGCCAAAAACAGCAGTTATTTATACAGCTGAAGAA
AACTTTGTGATTGGACAGGCCAAGGTGATCCGCCAGAGTGCAGTCGACAAGGTGACAGTTATTGGAGCAG
GGGTTACTCTGCATGAAGCCTTAGTAGCTGCTGAGGAGCTTTCTCAACAAGGGATTTTTATTCGTGTCAT
TGACCTGTTCACTATCAAACCTCTGGATGCTGTCACCATTATCCAAAGTGCCAAAGCCACAGGTGGCCAG
ATCATCACTGTGGAAGATCACTACCGAGAAGGTGGCATTGGTGAAGCTGTGTGTGCAGCCATCTCTAGAG
AGCCTGACATAGTCGTTCGTCAACTTGCAGTAACAGAAGTACCTCGAAGCGGGAAACCTAGCGAGCTACT
GGATATGTTTGGAATCAGTGCCAGACACATTATAGCAGCTGTGAAAGATACCGTAATGAAATGA

Translation (627 aa):
MALARDAKLESDTFQVLQDVANRLRIHSIRATCACSSGHPTSCCSVAEIMAVLFFHTMRYKQADPEHPDN
DRFVLSKGHAAPILYAVWVEVGRICESDLLNLRKIHCDLEGHPTPRLSFVDVATGSLGQGLGAACGMAYT
GKYFDKASYRVFCLMGDGESSEGSVWEALAFASHYNLDNLVAIFDVNRLGQSGTAPLEHCTAVYEKRCQA
FGWNTYVVDGHDVEALCQAFWKAAQVKNKPTALIAKTFKGRGIPNVEDAENWHGKPMPKDRADGIVKLIE
NRIQTNRNLTPKPPIEDSPRISMSNTKMTSLPVYKLGDMIATREAYGLALAKLGQSNQRVIVLDGDTKNS
TFSEVFKKEHPERFIECFIAEQNMVSVALGCATRGRTIAFVSTFAAFLTRAFDQIRMGAISQTNINFVGS
HCGVSVGEDGPSQMALEDLAMFRSIPNCTVFYPSDAVSTEHAVYLAANTKGMCFIRTTRPKTAVIYTAEE
NFVIGQAKVIRQSAVDKVTVIGAGVTLHEALVAAEELSQQGIFIRVIDLFTIKPLDAVTIIQSAKATGGQ
IITVEDHYREGGIGEAVCAAISREPDIVVRQLAVTEVPRSGKPSELLDMFGISARHIIAAVKDTVMK


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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