NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS14613.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14613.1 Public Homo sapiens X XPNPEP2 24 110 108 CCDS HistoryNCBI Gene:7512Re-query CCDS DB by CCDS ID:14613.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14613.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371106.4 ENSP00000360147.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000371106.4Link to Ensembl Protein Viewer:ENSP00000360147.3Re-query CCDS DB by Nucleotide ID:ENST00000371106Re-query CCDS DB by Protein ID:ENSP00000360147
Original member Current member NCBI NM_003399.6 NP_003390.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003399.6Link to Protein Sequence:NP_003390.4Re-query CCDS DB by Nucleotide ID:NM_003399Re-query CCDS DB by Protein ID:NP_003390Link to BLAST:NP_003390.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003390.4 674 O43895 674 100% 0 0

Chromosomal Locations for CCDS 14613.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 129739214 129739262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129742108 129742181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129743961 129744071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129745203 129745266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129746236 129746340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129746595 129746681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129747607 129747753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129750468 129750569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129751745 129751826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129752150 129752345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129753159 129753248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129754472 129754581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129755294 129755371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129756484 129756555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129759180 129759240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129760512 129760581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129761172 129761276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129762006 129762065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129762694 129762770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129767603 129767692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129768291 129768485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2025 nt):
ATGGCCCGGGCTCACTGGGGCTGCTGCCCCTGGCTGGTCCTCCTCTGTGCTTGTGCCTGGGGCCACACAA
AGCCAGTGGACCTTGGAGGGCAGGATGTGAGAAACTGTTCCACCAACCCCCCTTACCTTCCAGTTACTGT
GGTCAATACCACAATGTCACTCACAGCCCTCCGCCAGCAGATGCAGACCCAGAATCTCTCAGCCTACATC
ATCCCAGGCACAGATGCTCACATGAACGAGTACATCGGCCAACATGACGAGAGGCGTGCGTGGATTACAG
GCTTTACAGGGTCTGCAGGAACTGCAGTGGTGACTATGAAGAAAGCAGCTGTCTGGACCGACAGTCGCTA
CTGGACTCAGGCTGAGCGGCAGATGGACTGCAACTGGGAGCTCCATAAGGAAGTTGGCACCACTCCTATT
GTCACCTGGCTCCTCACCGAGATTCCTGCTGGAGGGCGTGTGGGTTTTGACCCCTTCCTCTTGTCCATTG
ACACCTGGGAGAGTTATGATCTGGCCCTCCAAGGCTCTAACAGACAGCTGGTGTCCATCACAACCAATCT
TGTGGACCTGGTATGGGGATCAGAGAGGCCACCGGTTCCAAATCAACCCATTTATGCCCTGCAGGAGGCA
TTCACAGGGAGCACTTGGCAGGAGAAAGTATCTGGCGTCCGAAGCCAGATGCAGAAGCATCAAAAGGTCC
CGACTGCCGTCCTTCTGTCGGCGCTTGAGGAGACGGCCTGGCTCTTCAACCTTCGAGCCAGTGACATCCC
CTATAACCCCTTCTTCTATTCCTACACGCTGCTCACAGACTCTTCTATTAGGTTGTTTGCAAACAAGAGT
CGCTTTAGCTCCGAAACCTTGAGCTATCTGAACTCCAGTTGCACAGGCCCCATGTGTGTGCAAATCGAGG
ATTACAGCCAAGTTCGTGACAGCATCCAGGCCTACTCATTGGGAGATGTGAGGATCTGGATTGGGACCAG
CTATACCATGTATGGGATCTATGAAATGATACCCAAGGAGAAACTCGTGACAGACACCTACTCCCCAGTG
ATGATGACCAAGGCAGTGAAGAACAGCAAGGAGCAGGCCCTCCTCAAGGCCAGCCACGTGCGGGACGCTG
TGGCTGTGATCCGGTACTTGGTCTGGCTGGAGAAGAACGTGCCCAAAGGCACAGTGGATGAGTTCTCGGG
GGCAGAGATCGTGGACAAGTTCCGAGGAGAAGAACAGTTCTCCTCCGGACCCAGTTTTGAAACCATCTCT
GCTAGTGGTCTGAATGCTGCCCTGGCCCACTACAGCCCGACCAAGGAGCTGAACCGCAAGCTGTCCTCAG
ATGAGATGTACCTGCTGGACTCTGGGGGGCAGTACTGGGACGGGACCACAGACATCACCAGAACAGTCCA
CTGGGGCACCCCCTCTGCCTTCCAGAAGGAGGCATACACCCGTGTGCTGATAGGAAATATTGACCTGTCC
AGGCTCATCTTTCCCGCTGCTACATCAGGGCGAATGGTGGAGGCCTTTGCCCGCAGAGCCTTGTGGGATG
CTGGTCTCAATTATGGTCATGGGACAGGCCACGGCATTGGCAACTTCCTGTGTGTGCATGAGTGGCCAGT
GGGATTCCAGTCCAACAACATCGCTATGGCCAAGGGCATGTTCACTTCCATTGAACCTGGTTACTATAAG
GATGGAGAATTTGGGATCCGTCTCGAAGATGTGGCTCTCGTGGTAGAAGCAAAGACCAAGTACCCAGGGA
GCTACCTGACCTTTGAAGTGGTATCATTTGTGCCCTATGACCGGAACCTCATCGATGTCAGCCTGCTGTC
TCCCGAGCATCTCCAGTACCTGAATCGCTACTACCAGACCATCCGGGAGAAGGTGGGTCCAGAGCTGCAG
AGGCGCCAGCTACTAGAGGAGTTCGAGTGGCTTCAACAGCACACAGAGCCCCTGGCCGCCAGGGCCCCAG
ACACCGCCTCCTGGGCCTCTGTGTTAGTGGTCTCCACCCTTGCCATCCTTGGCTGGAGTGTCTAG

Translation (674 aa):
MARAHWGCCPWLVLLCACAWGHTKPVDLGGQDVRNCSTNPPYLPVTVVNTTMSLTALRQQMQTQNLSAYI
IPGTDAHMNEYIGQHDERRAWITGFTGSAGTAVVTMKKAAVWTDSRYWTQAERQMDCNWELHKEVGTTPI
VTWLLTEIPAGGRVGFDPFLLSIDTWESYDLALQGSNRQLVSITTNLVDLVWGSERPPVPNQPIYALQEA
FTGSTWQEKVSGVRSQMQKHQKVPTAVLLSALEETAWLFNLRASDIPYNPFFYSYTLLTDSSIRLFANKS
RFSSETLSYLNSSCTGPMCVQIEDYSQVRDSIQAYSLGDVRIWIGTSYTMYGIYEMIPKEKLVTDTYSPV
MMTKAVKNSKEQALLKASHVRDAVAVIRYLVWLEKNVPKGTVDEFSGAEIVDKFRGEEQFSSGPSFETIS
ASGLNAALAHYSPTKELNRKLSSDEMYLLDSGGQYWDGTTDITRTVHWGTPSAFQKEAYTRVLIGNIDLS
RLIFPAATSGRMVEAFARRALWDAGLNYGHGTGHGIGNFLCVHEWPVGFQSNNIAMAKGMFTSIEPGYYK
DGEFGIRLEDVALVVEAKTKYPGSYLTFEVVSFVPYDRNLIDVSLLSPEHLQYLNRYYQTIREKVGPELQ
RRQLLEEFEWLQQHTEPLAARAPDTASWASVLVVSTLAILGWSV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH