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Report for CCDS77489.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77489.1 Public Homo sapiens 2 LNPK 24 110 108 CCDS HistoryNCBI Gene:80856Re-query CCDS DB by CCDS ID:77489.1Re-query CCDS DB by GeneID:80856See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 77489.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000544803.5 ENSP00000440905.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000544803.5Link to Ensembl Protein Viewer:ENSP00000440905.1Re-query CCDS DB by Nucleotide ID:ENST00000544803Re-query CCDS DB by Protein ID:ENSP00000440905
Original member Current member NCBI NM_001305009.1 NP_001291938.1 Accepted alive Link to Nucleotide Sequence:NM_001305009.1Link to Protein Sequence:NP_001291938.1Re-query CCDS DB by Nucleotide ID:NM_001305009Re-query CCDS DB by Protein ID:NP_001291938Link to BLAST:NP_001291938.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001291938.1 459 Q9C0E8-4 459 100% 0 0

Chromosomal Locations for CCDS 77489.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 175929967 175930199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 175937344 175937514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 175938313 175938383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 175939552 175939657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 175940988 175941080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 175947480 175947692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 175964372 175964423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 175964506 175964589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 175970764 175970804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 175979810 175979868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 175992231 175992418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 175993182 175993223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 175995558 175995584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1380 nt):
ATGGGTGGATTATTTTCTCGATGGAGGACAAAACCTTCAACTGTAGAAGTTCTAGAAAGTATAGATAAGG
AAATTCAAGCATTGGAAGAATTTAGGGAAAAAAATCAGAGATTACAAAAATTATGGGTTGGAAGATTAAT
TCTGTATTCCTCAGTTCTCTATCTGTTTACATGCTTAATTGTATATTTGTGGTATCTTCCTGATGAATTT
ACAGCAAGACTTGCCATGACACTCCCATTTTTTGCTTTTCCATTGATCATCTGGAGCATAAGAACAGTAA
TTATTTTCTTCTTTTCCAAGAGAACAGAAAGAAATAATGAAGCATTGGATGATTTAAAATCCCAGAGGAA
AAAAATACTTGAAGAAGTCATGGAAAAAGAAACTTACAAGACGGCTAAATTAATTCTTGAAAGGTTTGAT
CCGGACTCAAAGAAAGCAAAGGAGTGTGAGCCGCCATCTGCTGGAGCAGCTGTAACTGCAAGACCTGGAC
AAGAGATTCGTCAGCGAACTGCAGCTCAAAGAAACCTTTCTCCAACACCAGCAAGCCCTAACCAGGGCCC
TCCTCCACAAGTTCCAGTATCTCCTGGACCACCAAAGGACAGTTCTGCCCCTGGTGGACCCCCAGAAAGG
ACTGTTACTCCAGCCCTATCATCAAATGTGTTACCAAGACATCTTGGATCCCCTGCTACTTCAGTGCCTG
GAATGGAGATGGGGCTTCCTCATATTGCCCAGGCTGGTCTTGAACACCTGAGCTCAAGTGATCTGTCTAC
CTCGACCTCTCAAAGTGCTGGGATTACAGGTCTTCATCCTCCAGGTCCACCTTTAGCAAGACCTATTCTC
CCCCGAGAACGAGGTGCTTTGGATAGAATTGTTGAATATTTGGTTGGTGATGGTCCACAAAACAGGTATG
CACTTATATGTCAGCAGTGTTTTTCTCATAATGGCATGGCTTTGAAGGAAGAATTTGAATACATTGCTTT
TCGATGTGCCTACTGTTTTTTCTTGAACCCTGCAAGAAAAACCAGACCTCAGGCTCCAAGACTTCCTGAG
TTTAGTTTTGAGAAGAGGCAGGTGGTGGAAGGTTCAAGTTCAGTTGGTCCCTTGCCATCAGGAAGTGTGC
TTTCATCAGACAACCAGTTTAATGAAGAATCTTTAGAACACGATGTTCTTGATGATAATACAGAGCAGAC
AGATGACAAAATACCAGCTACAGAACAGACAAACCAAGTGATTGAAAAAGCATCTGACTCAGAGGAACCA
GAGGAGAAACAAGAGACTGAGAATGAGGAAGCCTCAGTGATTGAAACCAACTCCACAGTTCCTGGAGCTG
ATTCTATTCCTGATCCTGAACTAAGTGGAGAATCTTTGACGGCAGAGTAG

Translation (459 aa):
MGGLFSRWRTKPSTVEVLESIDKEIQALEEFREKNQRLQKLWVGRLILYSSVLYLFTCLIVYLWYLPDEF
TARLAMTLPFFAFPLIIWSIRTVIIFFFSKRTERNNEALDDLKSQRKKILEEVMEKETYKTAKLILERFD
PDSKKAKECEPPSAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPGGPPER
TVTPALSSNVLPRHLGSPATSVPGMEMGLPHIAQAGLEHLSSSDLSTSTSQSAGITGLHPPGPPLARPIL
PRERGALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCAYCFFLNPARKTRPQAPRLPE
FSFEKRQVVEGSSSVGPLPSGSVLSSDNQFNEESLEHDVLDDNTEQTDDKIPATEQTNQVIEKASDSEEP
EEKQETENEEASVIETNSTVPGADSIPDPELSGESLTAE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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