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Report for CCDS20726.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20726.1 Public Mus musculus 7 Rps9 23 108 98 CCDS HistoryNCBI Gene:76846Re-query CCDS DB by CCDS ID:20726.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20726.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000006496.14 ENSMUSP00000006496.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000006496.14Link to Ensembl Protein Viewer:ENSMUSP00000006496.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000006496Re-query CCDS DB by Protein ID:ENSMUSP00000006496
Original member Current member EBI ENSMUST00000108625.7 ENSMUSP00000104265.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000108625.7Link to Ensembl Protein Viewer:ENSMUSP00000104265.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000108625Re-query CCDS DB by Protein ID:ENSMUSP00000104265
Original member NCBI NM_029767.2 NP_084043.1 Updated not alive Link to Nucleotide Sequence:NM_029767.2Link to Protein Sequence:NP_084043.1Re-query CCDS DB by Nucleotide ID:NM_029767Re-query CCDS DB by Protein ID:NP_084043
Current member NCBI NM_029767.3 NP_084043.1 Accepted alive Link to Nucleotide Sequence:NM_029767.3Link to Protein Sequence:NP_084043.1Re-query CCDS DB by Nucleotide ID:NM_029767Re-query CCDS DB by Protein ID:NP_084043Link to BLAST:NP_084043.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_084043.1 194 Q6ZWN5 194 100% 0 0

Chromosomal Locations for CCDS 20726.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 3704352 3704448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 3704646 3704768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 3705733 3705919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 3706651 3706828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (585 nt):
ATGCCGGTCGCCAGAAGCTGGGTTTGTCGCAAAACCTATGTGACCCCACGGAGACCCTTCGAGAAGTCGC
GTCTCGACCAGGAGCTAAAGTTGATTGGAGAGTATGGACTCCGGAACAAACGTGAGGTTTGGAGGGTCAA
GTTTACCCTGGCCAAGATCCGTAAGGCGGCCCGGGAGCTGTTGACGCTAGACGAGAAGGATCCCCGGCGT
CTGTTTGAAGGCAATGCTCTCCTGCGGCGGCTTGTTCGCATTGGGGTGCTGGACGAGGGCAAGATGAAGC
TGGATTACATCCTGGGCCTGAAGATTGAGGATTTCTTGGAGAGGCGGCTGCAGACCCAGGTCTTTAAGCT
GGGCCTGGCCAAATCTATTCACCATGCCCGTGTGCTCATCCGCCAACGTCACATTAGGGTCCGCAAGCAG
GTGGTGAACATCCCATCCTTCATTGTTCGCCTGGACTCTCAGAAGCACATCGACTTCTCCCTCCGTTCTC
CTTATGGCGGCGGCCGTCCAGGCCGAGTGAAGAGGAAGAATGCCAAGAAAGGCCAGGGCGGGGCTGGAGC
TGGTGATGATGAGGAAGAGGATTAA

Translation (194 aa):
MPVARSWVCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR
LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQ
VVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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