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Report for CCDS4617.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4617.1 Public Homo sapiens 6 ZNF322 24 110 108 CCDS HistoryNCBI Gene:79692Re-query CCDS DB by CCDS ID:4617.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4617.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000415922.7 ENSP00000418897.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000415922.7Link to Ensembl Protein Viewer:ENSP00000418897.1Re-query CCDS DB by Nucleotide ID:ENST00000415922Re-query CCDS DB by Protein ID:ENSP00000418897
Original member Current member EBI ENST00000471278.5 ENSP00000419728.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000471278.5Link to Ensembl Protein Viewer:ENSP00000419728.1Re-query CCDS DB by Nucleotide ID:ENST00000471278Re-query CCDS DB by Protein ID:ENSP00000419728
Original member Current member EBI ENST00000456172.5 ENSP00000478899.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000456172.5Link to Ensembl Protein Viewer:ENSP00000478899.1Re-query CCDS DB by Nucleotide ID:ENST00000456172Re-query CCDS DB by Protein ID:ENSP00000478899
Original member Current member EBI ENST00000622479.4 ENSP00000482607.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000622479.4Link to Ensembl Protein Viewer:ENSP00000482607.1Re-query CCDS DB by Nucleotide ID:ENST00000622479Re-query CCDS DB by Protein ID:ENSP00000482607
Original member Current member EBI ENST00000607204.5 ENSP00000483223.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000607204.5Link to Ensembl Protein Viewer:ENSP00000483223.1Re-query CCDS DB by Nucleotide ID:ENST00000607204Re-query CCDS DB by Protein ID:ENSP00000483223
Original member Current member NCBI NM_001242797.2 NP_001229726.1 Accepted alive Link to Nucleotide Sequence:NM_001242797.2Link to Protein Sequence:NP_001229726.1Re-query CCDS DB by Nucleotide ID:NM_001242797Re-query CCDS DB by Protein ID:NP_001229726Link to BLAST:NP_001229726.1
Original member Current member NCBI NM_001242798.2 NP_001229727.1 Accepted alive Link to Nucleotide Sequence:NM_001242798.2Link to Protein Sequence:NP_001229727.1Re-query CCDS DB by Nucleotide ID:NM_001242798Re-query CCDS DB by Protein ID:NP_001229727Link to BLAST:NP_001229727.1
Original member Current member NCBI NM_001242799.2 NP_001229728.1 Accepted alive Link to Nucleotide Sequence:NM_001242799.2Link to Protein Sequence:NP_001229728.1Re-query CCDS DB by Nucleotide ID:NM_001242799Re-query CCDS DB by Protein ID:NP_001229728Link to BLAST:NP_001229728.1
Original member Current member NCBI NM_024639.5 NP_078915.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024639.5Link to Protein Sequence:NP_078915.2Re-query CCDS DB by Nucleotide ID:NM_024639Re-query CCDS DB by Protein ID:NP_078915Link to BLAST:NP_078915.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001229726.1 402 Q6U7Q0 402 100% 0 0
NP_001229727.1 402 Q6U7Q0 402 100% 0 0
NP_001229728.1 402 Q6U7Q0 402 100% 0 0
NP_078915.2 402 Q6U7Q0 402 100% 0 0

Chromosomal Locations for CCDS 4617.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 26637345 26638553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1209 nt):
ATGTACACTTCAGAAGAGAAATGTAATCAGAGAACTCAAAAAAGGAAAATATATAATGTATGCCCTCGGA
AGGGTAAAAAGATTTTTATTCATATGCATGAGATTATTCAGATAGATGGTCATATATACCAGTGCCTTGA
ATGCAAGCAAAACTTCTGTGAAAACTTAGCTCTTATTATGTGTGAGAGAACCCATACTGGGGAGAAACCT
TATAAATGTGATATGTGTGAGAAAACCTTTGTCCAAAGCTCAGATCTTACTTCACACCAGAGGATCCACA
ATTACGAGAAACCTTATAAATGTAGCAAATGTGAGAAGAGCTTTTGGCATCACTTAGCGCTTTCAGGACA
TCAGAGAACACATGCAGGTAAAAAATTCTATACATGTGACATTTGTGGCAAGAATTTTGGTCAGAGTTCT
GATCTGCTTGTCCACCAGCGAAGCCATACTGGCGAGAAACCATATCTATGTAGTGAGTGTGACAAATGCT
TCAGTAGAAGTACAAACCTCATAAGGCATCGAAGAACTCACACAGGTGAGAAACCATTTAAGTGTCTCGA
GTGTGAAAAAGCTTTTAGTGGGAAATCAGATCTTATTAGCCACCAGAGAACTCACACTGGGGAAAGGCCC
TACAAATGTAATAAGTGTGAGAAAAGTTACCGACACCGTTCAGCCTTCATTGTACATAAAAGAGTTCATA
CTGGGGAGAAGCCCTATAAGTGTGGTGCCTGTGAAAAATGCTTTGGCCAGAAATCAGACCTTATCGTGCA
CCAGAGAGTCCACACAGGTGAGAAGCCGTATAAATGCCTGGAATGTATGAGAAGTTTTACTCGGAGTGCC
AACCTAATTAGGCACCAGGCAACTCACACTCACACTTTTAAATGCCTTGAATATGAAAAAAGCTTTAACT
GTAGCTCAGATCTTATTGTACATCAGAGAATTCACATGGAAGAGAAACCACATCAGTGGTCTGCGTGTGA
GAGTGGCTTCCTCCTAGGAATGGACTTTGTTGCCCAACAGAAAATGAGAACTCAAACAGAGGAGCTACAC
TATAAATACACTGTATGTGATAAAAGCTTCCACCAGAGTTCAGCCCTTCTTCAACATCAGACAGTACACA
TTGGTGAAAAACCGTTTGTCTGTAATGTGAGTGAAAAAGGTCTTGAGCTTAGCCCTCCCCATGCGTCAGA
AGCCTCACAGATGTCTTGA

Translation (402 aa):
MYTSEEKCNQRTQKRKIYNVCPRKGKKIFIHMHEIIQIDGHIYQCLECKQNFCENLALIMCERTHTGEKP
YKCDMCEKTFVQSSDLTSHQRIHNYEKPYKCSKCEKSFWHHLALSGHQRTHAGKKFYTCDICGKNFGQSS
DLLVHQRSHTGEKPYLCSECDKCFSRSTNLIRHRRTHTGEKPFKCLECEKAFSGKSDLISHQRTHTGERP
YKCNKCEKSYRHRSAFIVHKRVHTGEKPYKCGACEKCFGQKSDLIVHQRVHTGEKPYKCLECMRSFTRSA
NLIRHQATHTHTFKCLEYEKSFNCSSDLIVHQRIHMEEKPHQWSACESGFLLGMDFVAQQKMRTQTEELH
YKYTVCDKSFHQSSALLQHQTVHIGEKPFVCNVSEKGLELSPPHASEASQMS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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