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Report for CCDS5896.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5896.1 Public Homo sapiens 7 ZNF212 24 110 108 CCDS HistoryNCBI Gene:7988Re-query CCDS DB by CCDS ID:5896.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5896.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000335870.7 ENSP00000338572.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000335870.7Link to Ensembl Protein Viewer:ENSP00000338572.2Re-query CCDS DB by Nucleotide ID:ENST00000335870Re-query CCDS DB by Protein ID:ENSP00000338572
Original member Current member NCBI NM_012256.4 NP_036388.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012256.4Link to Protein Sequence:NP_036388.2Re-query CCDS DB by Nucleotide ID:NM_012256Re-query CCDS DB by Protein ID:NP_036388Link to BLAST:NP_036388.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036388.2 495 Q9UDV6 495 100% 0 0

Chromosomal Locations for CCDS 5896.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 149239779 149239802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 149250159 149250548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 149250681 149250807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 149252706 149252795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 149253559 149254415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1488 nt):
ATGGCGGAGTCGGCGCCTGCTCGGCACAGGAGAAAACGACGCTCCACACCTTTAACTTCTTCCACACTTC
CTTCACAAGCAACAGAGAAAAGCTCCTATTTTCAGACCACCGAGATTTCACTCTGGACGGTGGTGGCCGC
TATTCAGGCTGTGGAGAAGAAGATGGAGTCCCAGGCTGCCCGGCTACAGAGCCTGGAGGGGCGCACGGGG
ACAGCCGAGAAGAAGCTGGCTGACTGCGAGAAGATGGCCGTGGAGTTCGGGAACCAGCTGGAGGGCAAGT
GGGCCGTGCTGGGGACCCTGCTGCAGGAGTATGGGCTACTGCAGAGGCGGCTGGAGAACGTGGAGAACCT
GCTGCGCAACAGGAACTTCTGGATCCTGCGGCTGCCCCCGGGCAGCAAGGGGGAGGCCCCCAAGGTGTCC
AGGTCACTGGAGAATGATGGCGTCTGTTTCACCGAGCAGGAATGGGAGAATCTGGAGGATTGGCAGAAGG
AGCTCTACAGAAACGTGATGGAGAGTAACTATGAGACACTGGTCTCTCTGAAGGTCCTTGGCCAGACAGA
GGGAGAAGCGGAGTTGGGTACAGAGATGCTGGGTGACTTGGAAGAGGAAGGTCCTGGTGGTGCCCACCCA
GCAGGTGGGGTCATGATCAAACAGGAGCTACAGTATACACAGGAAGGCCCTGCGGATCTTCCTGGAGAGT
TCTCATGCATTGCTGAAGAGCAGGCTTTCCTGAGCCCAGAGCAGACCGAACTCTGGGGTGGTCAGGGCAG
TTCTGTCCTCTTGGAAACAGGTCCTGGGGACTCTACTCTAGAGGAGCCTGTTGGTAGTAGAGTTCCTAGC
AGCAGCAGAACTGTGGGCTGCCCGAAGCAGAAATCTCATAGGCAGGTACAGCTGGACCAGGAATGTGGGC
AGGGCCTGAAGCTGAAAAAGGACACTTCCCGCCCCTACGAATGTTCTGAGTGTGAGATCACCTTCCGCTA
TAAGCAGCAGCTGGCCACACATCTGCGCAGCCACTCTGGGTGGGGGTCTTGTACACCTGAGGAGCCAGAG
GAGAGCCTTAGGCCCAGGCCACGGCTGAAACCACAGACCAAAAAGGCCAAGCTGCATCAGTGTGATGTGT
GCCTGAGGAGCTTCAGCTGCAAGGTGAGCCTGGTGACCCATCAGCGTTGCCACCTGCAGGAGGGGCCCAG
TGCCGGCCAGCATGTCCAAGAGAGGTTCTCACCCAACAGCCTGGTTGCCCTGCCTGGCCACATCCCTTGG
AGGAAAAGCCGGAGTTCCCTCATCTGTGGTTACTGTGGCAAGAGCTTCAGTCACCCATCTGACTTGGTGC
GGCACCAGCGCATCCACACGGGTGAGCGGCCCTACAGCTGCACTGAGTGTGAGAAGAGCTTTGTCCAGAA
GCAGCACCTCCTGCAGCACCAGAAGATCCACCAGCGGGAGCGGGGTGGGCTGGCCCTGGAGCCCGGAAGG
CCCAATGGCCTGCTTTAA

Translation (495 aa):
MAESAPARHRRKRRSTPLTSSTLPSQATEKSSYFQTTEISLWTVVAAIQAVEKKMESQAARLQSLEGRTG
TAEKKLADCEKMAVEFGNQLEGKWAVLGTLLQEYGLLQRRLENVENLLRNRNFWILRLPPGSKGEAPKVS
RSLENDGVCFTEQEWENLEDWQKELYRNVMESNYETLVSLKVLGQTEGEAELGTEMLGDLEEEGPGGAHP
AGGVMIKQELQYTQEGPADLPGEFSCIAEEQAFLSPEQTELWGGQGSSVLLETGPGDSTLEEPVGSRVPS
SSRTVGCPKQKSHRQVQLDQECGQGLKLKKDTSRPYECSECEITFRYKQQLATHLRSHSGWGSCTPEEPE
ESLRPRPRLKPQTKKAKLHQCDVCLRSFSCKVSLVTHQRCHLQEGPSAGQHVQERFSPNSLVALPGHIPW
RKSRSSLICGYCGKSFSHPSDLVRHQRIHTGERPYSCTECEKSFVQKQHLLQHQKIHQRERGGLALEPGR
PNGLL


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 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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