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Report for CCDS10102.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10102.1 Public Homo sapiens 15 ELL3 24 110 108 CCDS HistoryNCBI Gene:80237Re-query CCDS DB by CCDS ID:10102.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10102.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000319359.8 ENSP00000320346.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000319359.8Link to Ensembl Protein Viewer:ENSP00000320346.3Re-query CCDS DB by Nucleotide ID:ENST00000319359Re-query CCDS DB by Protein ID:ENSP00000320346
Original member Current member NCBI NM_025165.3 NP_079441.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_025165.3Link to Protein Sequence:NP_079441.1Re-query CCDS DB by Nucleotide ID:NM_025165Re-query CCDS DB by Protein ID:NP_079441Link to BLAST:NP_079441.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079441.1 397 Q9HB65-1 397 100% 0 0

Chromosomal Locations for CCDS 10102.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 43773116 43773226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43773304 43773348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43774182 43774353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43774476 43774518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43774596 43774773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43775306 43775381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43775525 43775610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43775722 43775923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43776039 43776151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43776509 43776544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43776770 43776901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1194 nt):
ATGGAGGAGCTCCAGGAGCCTCTGAGAGGACAGCTCCGGCTCTGCTTCACGCAAGCTGCCCGGACTAGCC
TCTTACTGCTCAGGCTCAACGACGCTGCCCTGCGGGCGCTGCAAGAGTGTCAGCGGCAACAGGTACGGCC
GGTGATTGCTTTCCAAGGCCACCGAGGGTATCTGAGACTCCCAGGCCCTGGTTGGTCCTGCCTCTTCTCC
TTCATAGTGTCCCAGTGTTGTCAGGAGGGCGCTGGTGGTAGCTTGGACCTTGTGTGCCAACGCTTCCTCA
GGTCTGGGCCTAACAGCCTCCACTGCCTGGGCTCACTCAGGGAGCGCCTCATTATTTGGGCAGCCATGGA
TTCTATCCCAGCCCCATCATCAGTTCAGGGACACAACCTGACTGAAGATGCCAGACATCCTGAGAGTTGG
CAGAACACAGGAGGCTATTCTGAAGGAGATGCAGTATCACAGCCACAGATGGCACTAGAGGAGGTGTCAG
TGTCAGATCCACTGGCAAGCAACCAAGGACAGTCACTCCCAGGATCCTCAAGGGAGCACATGGCACAGTG
GGAAGTGAGAAGCCAGACCCATGTTCCAAACAGAGAACCTGTTCAGGCACTGCCTTCCTCTGCCAGCCGG
AAACGTCTGGACAAGAAACGTTCAGTGCCTGTAGCCACTGTAGAACTGGAAGAAAAGAGGTTCAGAACTC
TGCCTTTAGTGCCAAGCCCCCTACAAGGCCTGACCAATCAGGATTTACAAGAGGGAGAAGATTGGGAGCA
AGAAGATGAGGACATGGACCCCAGATTAGAACACAGTTCCTCAGTTCAAGAAGATTCTGAATCCCCAAGT
CCTGAAGATATACCAGACTACCTCCTGCAATACAGGGCCATCCACAGTGCAGAACAGCAACATGCCTATG
AGCAGGACTTTGAGACAGATTATGCTGAATACCGCATCCTGCATGCCCGTGTTGGGACTGCAAGCCAAAG
GTTCATAGAGCTGGGAGCAGAGATTAAAAGAGTTCGGCGAGGAACTCCAGAATACAAGGTCCTGGAAGAC
AAGATAATCCAGGAATATAAAAAGTTCAGGAAGCAGTACCCAAGTTACAGAGAAGAAAAGCGTCGCTGTG
AGTACCTTCACCAGAAATTGTCCCACATTAAAGGTCTCATCCTGGAGTTTGAGGAAAAGAACAGGGGCAG
CTGA

Translation (397 aa):
MEELQEPLRGQLRLCFTQAARTSLLLLRLNDAALRALQECQRQQVRPVIAFQGHRGYLRLPGPGWSCLFS
FIVSQCCQEGAGGSLDLVCQRFLRSGPNSLHCLGSLRERLIIWAAMDSIPAPSSVQGHNLTEDARHPESW
QNTGGYSEGDAVSQPQMALEEVSVSDPLASNQGQSLPGSSREHMAQWEVRSQTHVPNREPVQALPSSASR
KRLDKKRSVPVATVELEEKRFRTLPLVPSPLQGLTNQDLQEGEDWEQEDEDMDPRLEHSSSVQEDSESPS
PEDIPDYLLQYRAIHSAEQQHAYEQDFETDYAEYRILHARVGTASQRFIELGAEIKRVRRGTPEYKVLED
KIIQEYKKFRKQYPSYREEKRRCEYLHQKLSHIKGLILEFEEKNRGS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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