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Report for CCDS30466.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
30466.1 |
Public |
Mus musculus |
X |
Maged2 |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:80884](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:30466.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome X in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 30466.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000026302.12 |
ENSMUSP00000026302.6 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000026302.12](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000026302.6](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000026302](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000026302](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000112697.9 |
ENSMUSP00000108317.3 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000112697.9](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000108317.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000112697](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000108317](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000112699.8 |
ENSMUSP00000108319.2 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000112699.8](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000108319.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000112699](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000108319](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000112700.7 |
ENSMUSP00000108320.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000112700.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000108320.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000112700](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000108320](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001199246.2 |
NP_001186175.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001199246.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001186175.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001199246](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001186175](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001186175.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001358566.1 |
NP_001345495.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001358566.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001345495.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001358566](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001345495](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001345495.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001358567.1 |
NP_001345496.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001358567.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001345496.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001358567](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001345496](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001345496.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001358568.1 |
NP_001345497.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001358568.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001345497.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001358568](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001345497](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001345497.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_030700.3 |
NP_109625.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_030700.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_109625.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_030700](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_109625](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_109625.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 30466.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1851 nt): ATGTCTGACACAAGCGAGAGTGGTGCAGATCCAGCTCGCTCTCAGGGCAAAGCTTCAGAAAAGGACAGCG GCTCCGTGATGCAGGACCTGTTGACCGTGACCCAGAACTTGGAGGTCTCAGAAACACCAAAGGCAGAAAA GGCACCAGAGGTTTCAGAGGCTGCAAAGGCTCCAAAAGCCTCTGGGAACCCAAAGGCGACAGAGGTCTCA AAGGCCCCAGAGGCGTCTGAGGCAGCTGCCACCCAGGCCTCACCTACCACACAGCTGAGTGAGACCCAAG TTCTGGCAACTGAAAACAAGAGTCCAGCAGCTGACACCAAGACGCAGAAGTCTGACCTGCAGGCTATGAC AATGCCTACAACCCCGACCAAAAAGGTCAGCTGTGGTACCGATCCAAAGGTCAATACAAAGGCTCCGGAG ACTGAGGCTCCTGCCTCTCAGGCTGGGACAGATGAACCAGAGCCTGAGGGTACAGCTGTCCAGGTTCAGG AGAACCAGGATACTCGGCCCAAGGTCAAAGCCAAGAATACCCAAAAGGGGAAACACCCGGATGGAGAAGA GGATGGCAACAGTGACCAGAGTCAGGCTTCAGAAGCCACAGGTGGTCGAAGGGTCTCAAAGGCCCTAATG GCCTCCATGGCTCGCAGAGCTTCAAGGGGACCCATAGCCTTTTGGGCCCGCAGGGCATCAAGGACTCGGT TGGCTGCCTGGGCTCGGAGAGCTTTGCTCTCCCTGAGGTCACCTAGAGCTCGCAGAGGCAAGGCCCGAAG AAGAGCTGCGAAGCTACAGTCATCCCAGGAACCTGAGGCACCCCCACCCAGAGATGTGGCCCTTTTACAA GGAAGGGCAAATGACTTGGTGAAGTACCTGTTGGCTAAAGACCAGACAAAGATTCCCATCAGACGCTCAG ATATGCTGAAGGACATCATCAAAGAATATACTGATGTATACCCTGAAATCATTGAACGAGCAGGCTATTC CTTGGAGAAGGTATTTGGAATCCAATTGAAAGAAATTGACAAGAATGACCACTTGTATATTCTTCTCAGT ACCTTAGAGCCAACTGATGCAGGCATATTGGGAACGACCAAGGACTCACCTAAGCTGGGCCTCCTCATGG TGCTTCTTAGCATCATCTTCATGAATGGAAATCGGTCCAGTGAGGCTGTCATCTGGGAGGTGCTGCGCAA GTTGGGGCTGCGCCCTGGGATTCATCACTCACTCTTTGGAGATGTGAAGAAACTCATTACTGATGAGTTT GTGAAGCAGAAGTACCTGGACTATGCCAGAGTACCCAATAGCAATCCTCCTGAGTACGAGTTCTTCTGGG GCCTACGCTCTTACTATGAGACCAGCAAGATGAAAGTTCTCAAGTTTGCTTGTAAGGTGCAAAAGAAGGA TCCCAAGGAATGGGCAGCTCAGTACCGAGAGGCAATGGAAGCAGATTTGAAGGCTGCAGCTGAGGCTGCT GCCGAAGCCAAGGCGAGGGCTGAGATTAGAGCTCAGATGGGCATTGGGCTTGGCTCTGAGAATGCCGCTG GGCCCTGCAACTGGGACGAAGCTGATATTGGACCCTGGGCAAAGGCCCGGATCCAGGCAGGAGCTGAAAC TAAAGCCAAAGCCCAAGGAAGTGGTGGTGCCAATGCCAGTGCTGGTGCCGGTGCCAGTACTGGTACCAGT GTTGGTGCCAGTGGCAGTGCCAGTGCTGGTGCCAGTGCTGGTGCCAGTGGTGGCTTCAGTAACAACTCCA GCCTGACTGCCAGTCTCACATTTGGGCTCTTCGCTGGCCTTAGTGGAGCTGGGGCCAGTACCAACAGCAG CTCTGGTGCCTGTGGTTTCTCCTACAAGTGA
Translation (616 aa): MSDTSESGADPARSQGKASEKDSGSVMQDLLTVTQNLEVSETPKAEKAPEVSEAAKAPKASGNPKATEVS KAPEASEAAATQASPTTQLSETQVLATENKSPAADTKTQKSDLQAMTMPTTPTKKVSCGTDPKVNTKAPE TEAPASQAGTDEPEPEGTAVQVQENQDTRPKVKAKNTQKGKHPDGEEDGNSDQSQASEATGGRRVSKALM ASMARRASRGPIAFWARRASRTRLAAWARRALLSLRSPRARRGKARRRAAKLQSSQEPEAPPPRDVALLQ GRANDLVKYLLAKDQTKIPIRRSDMLKDIIKEYTDVYPEIIERAGYSLEKVFGIQLKEIDKNDHLYILLS TLEPTDAGILGTTKDSPKLGLLMVLLSIIFMNGNRSSEAVIWEVLRKLGLRPGIHHSLFGDVKKLITDEF VKQKYLDYARVPNSNPPEYEFFWGLRSYYETSKMKVLKFACKVQKKDPKEWAAQYREAMEADLKAAAEAA AEAKARAEIRAQMGIGLGSENAAGPCNWDEADIGPWAKARIQAGAETKAKAQGSGGANASAGAGASTGTS VGASGSASAGASAGASGGFSNNSSLTASLTFGLFAGLSGAGASTNSSSGACGFSYK
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