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Report for CCDS32391.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32391.1 Public Homo sapiens 16 MRTFB 24 110 108 CCDS HistoryNCBI Gene:57496Re-query CCDS DB by CCDS ID:32391.1Re-query CCDS DB by GeneID:57496See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32391.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000318282.9 ENSP00000339086.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000318282.9Link to Ensembl Protein Viewer:ENSP00000339086.4Re-query CCDS DB by Nucleotide ID:ENST00000318282Re-query CCDS DB by Protein ID:ENSP00000339086
Original member Current member EBI ENST00000574045.5 ENSP00000459205.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000574045.5Link to Ensembl Protein Viewer:ENSP00000459205.1Re-query CCDS DB by Nucleotide ID:ENST00000574045Re-query CCDS DB by Protein ID:ENSP00000459205
Original member Current member NCBI NM_014048.4 NP_054767.3 Accepted alive Link to Nucleotide Sequence:NM_014048.4Link to Protein Sequence:NP_054767.3Re-query CCDS DB by Nucleotide ID:NM_014048Re-query CCDS DB by Protein ID:NP_054767Link to BLAST:NP_054767.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_054767.3 1049 Q9ULH7-4 1049 100% 0 0

Chromosomal Locations for CCDS 32391.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 14140607 14140760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 14210243 14210308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 14212354 14212409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 14213545 14213620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 14217126 14217287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 14218820 14218998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 14234146 14234283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 14240237 14240484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 14245528 14245660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 14246473 14247357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 14248926 14249081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 14251862 14252023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 14252365 14252502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 14258101 14258161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 14260909 14261444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3150 nt):
ATGGATCACACAGGGGCGATAGACACCGAGGATGAAGTGGGACCTTTAGCCCATCTTGCTCCAAGTCCTC
AGAGTGAAGCTGTGGCTCATGAATTCCAGGAACTCTCCTTGCAGTCCAGTCAAAACTTACCCCCTCTGAA
CGAAAGGAAAAATGTGCTCCAGCTGAGGCTGCAACAAAGGAGGACGAGAGAACAACTAGTGGACCAGGGC
ATCATGCCACCTTTGAAGAGCCCAGCGGCATTCCATGAACAGATAAAAAGCTTGGAACGAGCCAGAACTG
AAAACTTTTTGAAACACAAGATTCGGAGTCGACCAGATCGTTCTGAACTTGTCAGGATGCACATTTTAGA
AGAAACATTTGCAGAGCCATCCCTGCAGGCTACTCAGATGAAGTTGAAAAGAGCTCGACTAGCAGATGAT
CTGAATGAAAAGATTGCTCAAAGACCTGGTCCTATGGAGCTGGTAGAGAAAAACATCCTTCCTGTGGACT
CCAGTGTTAAAGAAGCAATTATAGGCGTTGGGAAGGAGGACTATCCCCACACTCAGGGCGATTTCTCATT
TGATGAAGACAGCAGTGACGCTTTGTCTCCGGACCAGCCTGCGAGTCAGGAGTCACAGGGGTCAGCCGCG
TCCCCAAGTGAGCCAAAAGTTAGTGAATCGCCATCTCCTGTGACTACAAACACTCCAGCGCAGTTTGCTT
CAGTGTCCCCAACAGTTCCTGAATTCTTGAAAACTCCTCCAACTGCAGATCAGCCTCCCCCACGGCCTGC
AGCTCCTGTCCTCCCCACAAACACTGTGTCCTCAGCAAAGCCTGGCCCAGCACTGGTGAAGCAAAGCCAT
CCCAAGAATCCAAATGACAAACACCGTAGCAAAAAGTGCAAAGATCCCAAACCACGGGTAAAGAAGTTAA
AGTACCACCAATACATTCCACCAGATCAGAAGGGTGAGAAGAATGAGCCGCAGATGGACTCTAACTACGC
CCGCCTGCTCCAGCAGCAGCAGCTGTTCCTGCAACTGCAGATCCTGAGTCAGCAGAAGCAGCACTACAAC
TACCAGACCATCCTGCCTGCACCATTCAAGCCACTCAATGACAAAAATAGTAACAGTGGGAATTCAGCTT
TGAACAATGCCACACCTAACACACCAAGACAGAATACATCTACTCCTGTGAGAAAGCCAGGACCTCTGCC
TTCTAGCCTGGATGACTTAAAGGTATCAGAACTGAAGACAGAACTGAAGTTAAGGGGTCTGCCAGTGTCA
GGCACCAAACCGGACCTCATTGAGCGCCTAAAACCCTACCAGGAAGTGAACAGCAGCGGCCTTGCTGCTG
GGGGCATCGTGGCAGTGTCATCATCAGCCATTGTCACCAGTAACCCAGAAGTCACTGTGGCCTTGCCGGT
TACAACACTACACAACACTGTGACTAGCTCAGTCTCTACTCTCAAGGCAGAATTGCCACCTACAGGAACC
AGCAACGCAACCCGTGTGGAAAATGTTCATTCCCCTCTGCCCATTTCACCATCTCCCTCCGAACAGTCCA
GTCTCAGTACTGATGACACAAACATGGCAGACACTTTCACCGAGATTATGACCATGATGTCGCCTTCACA
GTTCTTGAGTTCATCTCCTTTGAGAATGACAAATAATGAAGACAGTCTGAGTCCCACCAGCAGCACTCTG
TCAAACCTGGAACTGGATGCAGCCGAAAAGGATCGCAAGCTTCAGGAGAAAGAGAAGCAAATCGAAGAGC
TGAAGAGGAAACTGGAACAAGAGCAGAAGCTCGTGGAAGTGCTGAAAATGCAACTTGAGGTTGAAAAACG
AGGGCAGCAGCAGCGGCCCCTGGAAGCCCAGCCCAGTGCCCCAGGTCATTCTGTCAAGTCAGATCAGAAG
CACGGCAGCCTTGGCTCCTCCATCAAAGATGAGGCCTCACTCCCTGACTGCTCCAGCTCCAGGCAGCCCA
TCCCAGTAGCCAGCCACGCTGTAGGCCAGCCCGTCTCTACAGGTGGCCAGACCCTTGTTGCCAAAAAGGC
TGTAGTTATCAAGCAAGAGGTCCCTGTGGGCCAGGCAGAGCAGCAGAGTGTCGTCTCGCAGTTTTATACT
TCACCACAAGCAGGAATGCAGACTCAGCCTCAGATAGCAACTGCTGCACAAATACCAACTGCTGCCTTGG
CCTCAGGCTTGGCCCCAACTGTACCTCAGACACAAGACACGTTCCCGCAGCATGTGCTCAGTCAGCCTCA
ACAAGTCAGAAAGGTTTTCACAAACTCAGCATCATCAAATACAGTTCTTCCATATCAGAGACATCCTGCC
CCAGCTGTCCAGCAGCCCTTTATCAATAAGGCCTCCAACAGTGTTCTTCAATCCAGAAATGCTCCGCTTC
CATCCCTGCAAAATGGACCTAACACACCCAACAAGCCTAGTTCACCCCCGCCACCCCAGCAATTTGTCGT
CCAGCACTCTCTATTTGGGAGTCCAGTCGCCAAGACAAAAGATCCCCCCCGCTATGAGGAGGCCATCAAG
CAGACACGCAGCACACAGGCCCCTCTGCCAGAGATTTCCAACGCTCACAGTCAGCAGATGGATGACCTCT
TTGATATCCTCATTAAGAGTGGAGAGATCTCCCTCCCCATAAAAGAAGAACCTTCTCCTATTTCCAAAAT
GAGACCAGTGACAGCCAGCATCACCACAATGCCAGTGAATACAGTGGTGTCCCGGCCACCACCCCAAGTC
CAAATGGCACCACCTGTATCTTTAGAACCTATGGGCAGTTTATCTGCCAGCTTAGAGAACCAACTAGAAG
CTTTCTTGGATGGAACTTTACCCTCAGCCAATGAAATTCCTCCACTACAAAGCAGCAGTGAAGACAGAGA
GCCCTTCTCTCTGATCGAGGACCTCCAGAATGATCTGCTGAGTCACTCAGGTATGCTGGACCATTCACAC
TCACCCATGGAGACTTCCGAGACCCAGTTTGCTGCAGGTACTCCCTGTCTGTCTCTCGACCTGTCAGACT
CAAACTTGGACAACATGGAGTGGTTGGACATTACCATGCCCAACTCCTCTTCAGGACTCACTCCTCTCAG
CACCACCGCGCCGAGCATGTTCTCTGCTGACTTTCTAGACCCACAGGACCTACCGCTGCCATGGGACTAA

Translation (1049 aa):
MDHTGAIDTEDEVGPLAHLAPSPQSEAVAHEFQELSLQSSQNLPPLNERKNVLQLRLQQRRTREQLVDQG
IMPPLKSPAAFHEQIKSLERARTENFLKHKIRSRPDRSELVRMHILEETFAEPSLQATQMKLKRARLADD
LNEKIAQRPGPMELVEKNILPVDSSVKEAIIGVGKEDYPHTQGDFSFDEDSSDALSPDQPASQESQGSAA
SPSEPKVSESPSPVTTNTPAQFASVSPTVPEFLKTPPTADQPPPRPAAPVLPTNTVSSAKPGPALVKQSH
PKNPNDKHRSKKCKDPKPRVKKLKYHQYIPPDQKGEKNEPQMDSNYARLLQQQQLFLQLQILSQQKQHYN
YQTILPAPFKPLNDKNSNSGNSALNNATPNTPRQNTSTPVRKPGPLPSSLDDLKVSELKTELKLRGLPVS
GTKPDLIERLKPYQEVNSSGLAAGGIVAVSSSAIVTSNPEVTVALPVTTLHNTVTSSVSTLKAELPPTGT
SNATRVENVHSPLPISPSPSEQSSLSTDDTNMADTFTEIMTMMSPSQFLSSSPLRMTNNEDSLSPTSSTL
SNLELDAAEKDRKLQEKEKQIEELKRKLEQEQKLVEVLKMQLEVEKRGQQQRPLEAQPSAPGHSVKSDQK
HGSLGSSIKDEASLPDCSSSRQPIPVASHAVGQPVSTGGQTLVAKKAVVIKQEVPVGQAEQQSVVSQFYT
SPQAGMQTQPQIATAAQIPTAALASGLAPTVPQTQDTFPQHVLSQPQQVRKVFTNSASSNTVLPYQRHPA
PAVQQPFINKASNSVLQSRNAPLPSLQNGPNTPNKPSSPPPPQQFVVQHSLFGSPVAKTKDPPRYEEAIK
QTRSTQAPLPEISNAHSQQMDDLFDILIKSGEISLPIKEEPSPISKMRPVTASITTMPVNTVVSRPPPQV
QMAPPVSLEPMGSLSASLENQLEAFLDGTLPSANEIPPLQSSSEDREPFSLIEDLQNDLLSHSGMLDHSH
SPMETSETQFAAGTPCLSLDLSDSNLDNMEWLDITMPNSSSGLTPLSTTAPSMFSADFLDPQDLPLPWD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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