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Report for CCDS25432.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
25432.1 Public Mus musculus 11 Kat2a 23 108 98 CCDS HistoryNCBI Gene:14534Re-query CCDS DB by CCDS ID:25432.1Re-query CCDS DB by GeneID:14534See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 25432.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000006973.11 ENSMUSP00000006973.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000006973.11Link to Ensembl Protein Viewer:ENSMUSP00000006973.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000006973Re-query CCDS DB by Protein ID:ENSMUSP00000006973
Original member Current member NCBI NM_001038010.2 NP_001033099.1 Accepted alive Link to Nucleotide Sequence:NM_001038010.2Link to Protein Sequence:NP_001033099.1Re-query CCDS DB by Nucleotide ID:NM_001038010Re-query CCDS DB by Protein ID:NP_001033099Link to BLAST:NP_001033099.1

Chromosomal Locations for CCDS 25432.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 100705238 100705431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 100705576 100705660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 100705761 100705824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 100705959 100705995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 100706083 100706197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 100706350 100706493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 100706858 100706968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 100708209 100708335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 100708547 100708755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 100708846 100708982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 100709076 100709177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 100709383 100709489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 100710445 100710636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 100710722 100710903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 100711140 100711229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 100711333 100711478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 100711813 100711936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 100712081 100712404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2490 nt):
ATGGCGGAACCTTCCCAGGCCCCAAACCCGGTCCCGGCAGCGCAGCCCCGGCCCCTTCACTCCCCAGCCC
CTGCCCCAACTTCGACTCCTGCGCCCAGTCCGGCTTCAGCCTCCACTCCGGCTCCGACTCCGGCACCAGC
CCCTGCCCCAGCTGCAGCCCCAGCTGGGAGCACAGGGAGTGGGGGCGCCGGGGTAGGAAGTGGGGGGGAT
CCGGCTCGACCTGGCCTGAGCCAGCAGCAGCGCGCTAGCCAGAGGAAGGCGCAAGTCCGGGGTCTGCCGC
GTGCCAAGAAGCTTGAGAAACTAGGGGTCTTCTCAGCTTGCAAGGCCAATGAAACCTGCAAGTGTAATGG
CTGGAAAAACCCCAAGCCCCCCACCGCACCCCGCATGGACCTCCAGCAGCCAGCTGCCAACCTGAGCGAG
TTGTGCCGTAGCTGTGAGCACCCTTTGGCGGACCATGTGTCCCACCTGGAGAATGTGTCAGAGGACGAGA
TTAACCGGCTCTTGGGAATGGTAGTAGATGTAGAAAATCTGTTCATGTCTGTTCACAAGGAAGAGGACAC
AGACACCAAACAAGTCTATTTCTACCTCTTCAAGCTCTTGCGGAAGTGCATTCTGCAGATGACACGGCCA
GTGGTGGAGGGGTCTCTAGGCAGCCCCCCATTTGAGAAGCCTAACATTGAACAGGGTGTACTGAACTTTG
TGCAGTACAAATTTAGCCACCTGGCCCCCCGAGAGCGCCAGACAATGTTTGAGCTCTCAAAGATGTTCCT
GCTCTGCCTTAACTACTGGAAGCTGGAGACCCCTGCTCAATTCCGGCAGCGGTCCCAGTCTGAGGATGTC
GCTACCTACAAAGTCAATTATACCAGATGGCTCTGTTACTGCCACGTGCCCCAGAGCTGCGACAGCCTCC
CCCGCTACGAGACCACCCACGTGTTTGGCCGAAGCCTTCTACGGTCCATTTTCACTGTCACCCGCCGGCA
GCTACTGGAAAAATTTCGGGTGGAAAAGGACAAACTGGTGCCTGAGAAGAGGACCCTCATCCTCACTCAC
TTCCCCAAATTCCTGTCCATGCTTGAGGAAGAGATCTACGGGGCAAATTCTCCCATCTGGGAGTCAGGCT
TCACCATGCCACCTTCGGAGGGGACACAGCTGGTGCCCCGGCCAGCCACGGTCAGTGCAACAGTTGTACC
CAGCTTCAGTCCTTCCATGGGAGGAGGCAGCAACAGCTCCCTGAGCCTAGATTCCGCAGGGACTGAGCCC
ATGCCAGGGGAGAAGAGGAAGCTTCCTGAGAACCTGACCCTGGAGGATGCCAAGCGGCTCCGCGTGATGG
GGGACATCCCCATGGAGCTGGTCAATGAGGTCATGCTGACGATCACTGACCCCGCTGCCATGCTGGGGCC
TGAGACAAGCCTGCTTTCGGCCAACGCAGCTCGAGATGAGACGGCTCGCCTGGAAGAACGGCGAGGAATC
ATCGAGTTCCACGTCATTGGCAACTCCCTGACGCCCAAGGCCAACCGGCGCGTGCTGCTCTGGCTCGTGG
GGCTGCAGAATGTCTTTTCCCACCAGCTGCCAAGAATGCCCAAGGAATATATCGCCCGCCTCGTCTTTGA
CCCGAAGCACAAGACCCTGGCCCTGATCAAGGATGGGCGGGTCATCGGTGGCATTTGCTTCCGCATGTTT
CCCACTCAGGGCTTCACGGAAATCGTCTTCTGTGCCGTCACCTCAAATGAGCAGGTCAAGGGCTATGGCA
CCCACCTGATGAACCACCTAAAGGAGTACCACATCAAACACAGCATCCTTTACTTTCTCACCTATGCTGA
CGAGTACGCCATTGGCTACTTCAAAAAGCAGGGCTTCTCCAAAGACATCAAGGTGCCCAAGAGCCGCTAT
CTGGGCTACATCAAGGACTATGAAGGAGCGACGCTGATGGAGTGTGAGCTGAATCCCCGAATCCCCTACA
CAGAGCTGTCCCACATCATCAAGAAACAGAAAGAGATCATCAAGAAGTTGATTGAGCGCAAACAGGCACA
GATCCGCAAGGTCTACCCTGGACTCAGCTGCTTCAAAGAGGGAGTGAGGCAGATCCCGGTGGAGAGCGTC
CCTGGCATTCGAGAGACAGGCTGGAAGCCACTGGGAAAGGAGAAGGGCAAGGAGCTTAAGGATCCTGATC
AGCTATATACGACCCTCAAAAACCTGCTGGCTCAGATCAAGTCACACCCCAGTGCCTGGCCCTTCATGGA
ACCTGTGAAGAAGTCAGAGGCTCCTGACTACTACGAGGTTATCCGTTTCCCCATTGACCTGAAGACCATG
ACAGAACGGTTGCGCAGTCGCTACTATGTGACCCGGAAGCTCTTCGTAGCTGACCTGCAGCGGGTCATCG
CCAACTGCCGGGAGTACAATCCCCCAGACAGCGAATACTGTCGCTGCGCCAGTGCCCTGGAGAAGTTCTT
CTACTTCAAGCTCAAAGAGGGAGGGCTCATCGACAAGTAG

Translation (829 aa):
MAEPSQAPNPVPAAQPRPLHSPAPAPTSTPAPSPASASTPAPTPAPAPAPAAAPAGSTGSGGAGVGSGGD
PARPGLSQQQRASQRKAQVRGLPRAKKLEKLGVFSACKANETCKCNGWKNPKPPTAPRMDLQQPAANLSE
LCRSCEHPLADHVSHLENVSEDEINRLLGMVVDVENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMTRP
VVEGSLGSPPFEKPNIEQGVLNFVQYKFSHLAPRERQTMFELSKMFLLCLNYWKLETPAQFRQRSQSEDV
ATYKVNYTRWLCYCHVPQSCDSLPRYETTHVFGRSLLRSIFTVTRRQLLEKFRVEKDKLVPEKRTLILTH
FPKFLSMLEEEIYGANSPIWESGFTMPPSEGTQLVPRPATVSATVVPSFSPSMGGGSNSSLSLDSAGTEP
MPGEKRKLPENLTLEDAKRLRVMGDIPMELVNEVMLTITDPAAMLGPETSLLSANAARDETARLEERRGI
IEFHVIGNSLTPKANRRVLLWLVGLQNVFSHQLPRMPKEYIARLVFDPKHKTLALIKDGRVIGGICFRMF
PTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHSILYFLTYADEYAIGYFKKQGFSKDIKVPKSRY
LGYIKDYEGATLMECELNPRIPYTELSHIIKKQKEIIKKLIERKQAQIRKVYPGLSCFKEGVRQIPVESV
PGIRETGWKPLGKEKGKELKDPDQLYTTLKNLLAQIKSHPSAWPFMEPVKKSEAPDYYEVIRFPIDLKTM
TERLRSRYYVTRKLFVADLQRVIANCREYNPPDSEYCRCASALEKFFYFKLKEGGLIDK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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