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Report for CCDS2298.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2298.1 Public Homo sapiens 2 WDR75 24 110 108 CCDS HistoryNCBI Gene:84128Re-query CCDS DB by CCDS ID:2298.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2298.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000314761.9 ENSP00000314193.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000314761.9Link to Ensembl Protein Viewer:ENSP00000314193.4Re-query CCDS DB by Nucleotide ID:ENST00000314761Re-query CCDS DB by Protein ID:ENSP00000314193
Original member Current member NCBI NM_032168.3 NP_115544.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032168.3Link to Protein Sequence:NP_115544.1Re-query CCDS DB by Nucleotide ID:NM_032168Re-query CCDS DB by Protein ID:NP_115544Link to BLAST:NP_115544.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115544.1 830 Q8IWA0 830 100% 0 0

Chromosomal Locations for CCDS 2298.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 189441493 189441578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 189448379 189448508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 189450903 189450968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 189451805 189451895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 189455320 189455444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 189457311 189457381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 189458753 189458872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 189459336 189459424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 189462484 189462642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 189463694 189463753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 189463846 189463961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 189465079 189465254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 189466425 189466582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 189467468 189467648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 189468475 189468569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 189469344 189469439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 189470076 189470245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 189470819 189470878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 189474186 189474332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 189474717 189474808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 189475213 189475417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2493 nt):
ATGGTGGAGGAGGAGAACATCCGCGTGGTTCGTTGTGGCGGCAGCGAGTTGAACTTTAGGAGAGCTGTGT
TCTCTGCAGATTCTAAGTATATCTTCTGTGTCTCTGGAGACTTTGTTAAAGTTTACAGCACAGTTACAGA
AGAGTGTGTACACATACTGCATGGACACAGAAATCTGGTGACTGGAATCCAGCTTAACCCCAACAACCAT
CTACAGCTGTATTCTTGTTCCCTTGATGGCACAATTAAACTGTGGGACTATATAGATGGCATCTTAATAA
AGACTTTCATAGTTGGATGTAAACTTCATGCCCTCTTTACTCTTGCCCAAGCTGAGGATTCTGTCTTTGT
TATAGTGAATAAAGAAAAACCAGATATATTTCAGCTGGTTTCAGTGAAACTGCCAAAATCCTCAAGCCAG
GAAGTAGAAGCCAAGGAGCTGTCCTTTGTTTTGGATTACATAAACCAGTCACCCAAGTGCATTGCCTTTG
GAAACGAGGGAGTATATGTTGCTGCAGTACGGGAATTTTACTTGTCTGTTTATTTTTTCAAAAAGAAAAC
AACATCAAGGTTTACTTTATCATCATCAAGAAATAAGAAGCATGCTAAAAACAATTTTACATGTGTAGCA
TGTCACCCAACGGAAGACTGCATCGCATCTGGTCACATGGATGGCAAAATTCGTCTTTGGAGGAATTTTT
ATGATGATAAGAAATATACGTACACATGTTTACATTGGCACCATGATATGGTTATGGATTTGGCTTTTTC
AGTGACAGGCACCAGTCTGCTGAGTGGCGGTCGTGAATCTGTACTTGTAGAGTGGCGCGATGCAACAGAG
AAGAATAAGGAGTTTCTCCCGCGTTTAGGAGCTACTATTGAACATATCTCAGTCTCGCCTGCAGGAGATT
TATTCTGCACTTCTCACTCTGATAATAAGATAATAATTATTCACCGAAACCTTGAAGCATCCGCAGTAAT
TCAAGGCCTAGTGAAAGATAGGAGTATCTTCACTGGTTTGATGATTGATCCAAGAACTAAAGCTTTGGTT
TTGAATGGAAAACCTGGCCACCTGCAGTTTTATTCTCTCCAGAGTGATAAACAGTTATACAATTTAGATA
TTATACAGCAAGAATATATTAATGATTATGGTCTGATCCAAATTGAACTAACAAAGGCTGCATTTGGCTG
CTTTGGTAACTGGCTTGCAACAGTGGAACAGCGGCAAGAAAAGGAAACTGAGCTTGAATTGCAAATGAAA
CTGTGGATGTATAATAAGAAAACACAAGGGTTTATTCTTAACACTAAAATTAACATGCCACACGAAGACT
GCATTACAGCTCTCTGTTTCTGTAATGCAGAAAAATCTGAACAGCCCACCTTGGTTACAGCTAGCAAAGA
TGGTTACTTCAAAGTATGGATATTAACAGATGACTCTGACATATACAAAAAAGCTGTTGGCTGGACCTGT
GACTTTGTTGGTAGTTATCACAAGTATCAAGCAACTAACTGTTGTTTCTCCGAAGATGGTTCTTTACTAG
CAGTTAGTTTTGAGGAAATAGTCACAATATGGGATTCTGTAACATGGGAACTTAAATGTACATTTTGCCA
ACGAGCTGGGAAAATAAGGCACCTTTGCTTTGGGAGATTGACGTGTTCAAAGTATCTACTTGGTGCTACT
GAAAATGGCATTCTTTGCTGTTGGAATCTGCTGAGCTGTGCATTGGAGTGGAATGCAAAATTAAATGTTA
GAGTTATGGAACCCGATCCTAATTCAGAGAATATTGCTGCAATCTCTCAGTCTTCAGTGGGTTCAGACTT
GTTTGTATTTAAACCTAGTGAGCCAAGGCCATTGTATATTCAAAAGGGTATCTCCAGAGAGAAAGTCCAG
TGGGGAGTGTTTGTTCCACGAGATGTCCCTGAATCCTTCACCTCAGAAGCTTACCAGTGGCTAAATAGAT
CCCAGTTTTACTTCCTAACAAAATCACAGAGTTTATTGACATTCAGTACAAAGTCTCCAGAAGAAAAACT
CACACCAACAAGCAAACAGCTGCTAGCAGAAGAAAGTCTTCCCACAACCCCATTTTATTTCATATTGGGA
AAACACAGGCAACAGCAGGATGAAAAACTAAACGAAACTTTAGAGAATGAGCTGGTACAACTACCCTTAA
CAGAAAACATACCCGCAATTAGTGAGCTTCTTCACACTCCAGCCCATGTCCTGCCATCTGCTGCTTTCCT
GTGCTCCATGTTTGTAAATTCATTGCTGCTGTCTAAAGAGACTAAGAGTGCTAAGGAAATTCCTGAAGAT
GTAGATATGGAAGAAGAAAAAGAAAGTGAAGATTCAGATGAAGAAAATGATTTTACCGAAAAAGTCCAGG
ATACAAGTAACACAGGTTTAGGAGAAGACATTATACATCAGTTGTCAAAATCTGAAGAAAAAGAACTGAG
AAAATTTAGGAAAATAGACTACAGCTGGATAGCTGCCCTTTAA

Translation (830 aa):
MVEEENIRVVRCGGSELNFRRAVFSADSKYIFCVSGDFVKVYSTVTEECVHILHGHRNLVTGIQLNPNNH
LQLYSCSLDGTIKLWDYIDGILIKTFIVGCKLHALFTLAQAEDSVFVIVNKEKPDIFQLVSVKLPKSSSQ
EVEAKELSFVLDYINQSPKCIAFGNEGVYVAAVREFYLSVYFFKKKTTSRFTLSSSRNKKHAKNNFTCVA
CHPTEDCIASGHMDGKIRLWRNFYDDKKYTYTCLHWHHDMVMDLAFSVTGTSLLSGGRESVLVEWRDATE
KNKEFLPRLGATIEHISVSPAGDLFCTSHSDNKIIIIHRNLEASAVIQGLVKDRSIFTGLMIDPRTKALV
LNGKPGHLQFYSLQSDKQLYNLDIIQQEYINDYGLIQIELTKAAFGCFGNWLATVEQRQEKETELELQMK
LWMYNKKTQGFILNTKINMPHEDCITALCFCNAEKSEQPTLVTASKDGYFKVWILTDDSDIYKKAVGWTC
DFVGSYHKYQATNCCFSEDGSLLAVSFEEIVTIWDSVTWELKCTFCQRAGKIRHLCFGRLTCSKYLLGAT
ENGILCCWNLLSCALEWNAKLNVRVMEPDPNSENIAAISQSSVGSDLFVFKPSEPRPLYIQKGISREKVQ
WGVFVPRDVPESFTSEAYQWLNRSQFYFLTKSQSLLTFSTKSPEEKLTPTSKQLLAEESLPTTPFYFILG
KHRQQQDEKLNETLENELVQLPLTENIPAISELLHTPAHVLPSAAFLCSMFVNSLLLSKETKSAKEIPED
VDMEEEKESEDSDEENDFTEKVQDTSNTGLGEDIIHQLSKSEEKELRKFRKIDYSWIAAL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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